Ursus americanus (American black bear): 123803405
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Entry
123803405 CDS
T07931
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123803405 (SHOC1)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123803405 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
123803405
NCBI-ProteinID:
XP_045670780
LinkDB
All DBs
Position
Unknown
AA seq
1506 aa
AA seq
DB search
MFSTFKYCAIDYLYENIVRKKFCRDALLLRVPSCLYQDAGVTDNKFRRPWMRVSAVSVWG
MTDDISVLDQWKASLFVEEFLEKKAITGMVIQTDYGFEEVVPSSNPNSQTEIEEASLYTH
KDYTEVFTLVSGLEKCPALQIQNRDLSIDEEILFLNNLMTYKSQLPTSHTLLSRLKLFLV
KDPILDFKEQIFTEANFFRECFSFQGDLKDLVKEDFYMDKENFCQEKLEDTVGLNETPSI
LPECEFLIPTNLKQEVDIPSLTELKESLNLMPEIINYADENEKLFKIELTTKHGIDIEDI
KCSSTEILAIQSHCEPEYSEPVELEMPLTHLHRTNQHSSMTSLCTGLQTFPFSPVCKISL
LTTEESVSKNWMVWQLESCRSSLKPFLLTVPRTEEPNSQYSAMDLKKIFSIEEERLVVNP
VSTEWWEKGRLNLKEAETLEHLNTYLCHDDLSSDDTKMEIFLPIKVIQLESWLEHKSCSS
PIVLTNEKSTNDHLLLPQKISSPAEEIPDLCFSDDNSSVKQPTKEEKPKNDLELVYRISQ
NKENEDYLELDCAVPSIESSSSPKIEKPSFKHGKKWENDLDLLSDFIMLRNKYKTCTSKT
EVTGSKENDDEEHCLNLQEESPPVCTNKAIEKINQDKGVDNVIKIQASDSQCQAFCLLEA
AATPILKKLVCLCTLPTANWTFATVIFDQTRFLLKEQEKVISDAIQQGTNNEKEMTFKHA
AVLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKSILGFYLDDIWRQLEIVQFIRGKKPET
NYKIQELQSQILNWMQSEQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVLHSNKRKD
FLEPERVLNGTSSCVVVHNQYIGSDFPWSNFSFVVEYNFVENSCWTKHCEKLNIPHKVFK
VILPDTVLKRSNLLDSFGGFLLEIQVPYVFFASEGLLNTPEILQLLESKYNITLVERCCS
ESLKLFGGTECYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILYT
KKTLNSEYILQKKTLHHLALIYAALVTFGLKSEELDIKLIIAPGVEEAALIIRQIADHNL
MTSKRDPHEWLDKSWLDVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQ
ELLPEVPEKVLKHFCSITSLFKISSSSITNSSQSPSPQENGNQTSTFTSQNSACDSSNSV
FQEHNEYYHYSDIGETVHGDTNSTLNYNSSLMELREMPCILPPVTSYNQASHWKDSSCNP
NIVHNPFLINTESRNVAGNSFQNQNDSESDVFYLDLTQMNCENIISPIDTQKRVAPNFIN
YKKKGTHDAKGPINIEVSAPNFSLEGSPSPLPWNFKKNVWEQQNHSFNLEYDAGETTCDK
WYSQKDNLITNQQKCLSDELEGFICESSNAGTKKTFWKELPSVPSLDLFCASDPNVNQKE
FSSLRFHQRAGKCSGQKRHSESSPNSGGMKSLPDFMCSQLPKFKKRRLVYEKVPGRVDGQ
TRLRFF
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcgagtcccttcatgtttatatcaagatgcagga
gttactgataataaatttaggaggccatggatgagagtttcagctgtttcagtgtgggga
atgacagatgatatttcagtgttggatcaatggaaagcaagtctctttgtggaggagttc
ctagagaaaaaagcaattacaggaatggtgattcagactgactatggttttgaggaagtt
gttccaagttcaaacccaaactcccaaactgaaatagaggaagccagtttatatacccat
aaggactacactgaagtctttacacttgtcagcggtttagaaaaatgtccagcacttcaa
atacagaacagagatttgtctattgatgaagaaatactttttttaaataacttgatgacc
tataaaagtcagctaccaacttctcatactttgttgagtaggctaaaactatttttggta
aaagaccccattttagatttcaaagaacagatcttcacagaagctaatttcttcagggaa
tgtttctcttttcaaggagatttgaaagatctagtaaaagaagatttttacatggataaa
gagaacttttgtcaggaaaagctagaagatacggtaggtttaaatgaaactccatcaatt
ttgcctgagtgtgaattcttaatacctacaaacctcaaacaagaagttgatattccatca
ctcaccgaactgaaggaatccttaaacttaatgccagaaataataaattatgcagatgaa
aatgaaaagcttttcaaaatagaacttactaccaagcatggaattgacattgaggatata
aaatgcagctccacagagattttggccattcaaagccattgtgaaccagaatacagtgaa
ccagtagagttagaaatgccattaactcatctacatcgaacaaaccaacattcttccatg
acttcattatgtacaggacttcagacatttccattttctcctgtttgtaaaattagtttg
cttaccactgaggaatcagttagcaaaaactggatggtgtggcagttagaaagctgcaga
agctcattgaaaccatttttgctcacagtgccaaggactgaagagcccaacagtcaatat
tctgctatggatttgaaaaagatattttctattgaagaagaaaggcttgtagttaatcct
gtaagcacagagtggtgggaaaaaggaagactaaatctgaaagaggcagaaactttggaa
catctgaatacatatttgtgtcatgatgatctatcttctgatgatactaaaatggagata
tttttgccaataaaagtgattcaattagaatcatggctagaacataaaagttgttcctca
cctattgtacttactaatgagaagtctacaaatgatcatttattacttccacaaaagatt
tcatctccagcagaagaaataccagacctgtgtttttctgatgacaattcatctgttaaa
caaccaacaaaagaagaaaaaccaaagaatgatctagaactagtttatagaataagccaa
aataaagaaaatgaagattacttggaacttgactgtgcagtaccatctattgaatcatct
tcctctccaaaaattgaaaaaccatcttttaaacatggtaaaaaatgggagaatgatttg
gatcttttgagtgactttattatgctgcgaaataaatataagacttgcacctcaaagact
gaagtcacaggaagtaaagaaaatgatgatgaagaacattgtttgaatcttcaggaagaa
agtcctcctgtttgtactaataaagccatagagaaaataaatcaggataagggagtggat
aatgtcattaaaattcaagcgtcagacagccagtgccaagcattctgtctcctagaagca
gcagctactcctatcttaaaaaaactcgtatgcctctgtactctacctacagctaattgg
acatttgccactgtcatttttgaccaaacaaggttcctcttaaaggaacaagaaaaagta
ataagtgatgctattcagcaaggtacaaataatgaaaaagaaatgacgttcaagcatgct
gctgtcttacatcttctggtaacaattagagatgtccttttaacatgtagcttggacaca
gcattgggatatttgtcaaatgcaaaagatatctacaaaagcattttaggcttctatttg
gatgacatttggagacagctggagattgtacagtttattagggggaaaaagcctgaaacc
aattacaagatacaagaactgcaaagtcagatactaaattggatgcaaagtgagcaacag
attaaggtgctgattataataagaatggactcagatggtgaaaaacatttactcattaaa
atccttaacaaaatggaaggtttaacattgactgtcttacattcaaacaaaaggaaagat
tttctggaacctgaacgtgttttaaatggtacaagttcctgtgtggttgtacataatcaa
tatattggatcagattttccctggagtaacttctcatttgtggtggaatacaattttgta
gaaaactcttgttggactaaacactgcgagaagttgaacattcctcacaaggtcttcaaa
gtgattcttccagacacagttttaaagagaagcaacctgctggatagttttggtggattt
cttttggaaattcaggttccatatgtgttttttgcatctgaaggacttcttaatactcca
gaaatacttcagttgctagaatccaagtataatatcacactagtggagagatgctgcagt
gagtcgctgaaactctttggaggtacagagtgttatgtagtggtgacaattgatgaacac
actgccataattttgcaggacctagaagaattgaattgtgagaaggcatcagacaatatc
attatgagactgatggcattatcattccaatacagctactgttggataatcttatatacc
aaaaaaacattaaactcagagtacatcttacagaaaaaaacacttcatcatctagcattg
atttatgcagctttggtaacatttgggctaaaatcagaagaactggatataaagcttata
attgccccaggagtggaagaggctgcactgataattcggcaaattgctgatcacaattta
atgacctcgaagagagatcctcatgaatggttggataaatcttggcttgacgtttcacca
tctaaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcagctc
atgttaaacaaaggaccttcactgcactggatattattagcaactctgtgtcaacttcag
gagcttttacctgaagttccagaaaaagtgttaaagcatttttgtagcatcacttcctta
ttcaagattagttcttcttccataacaaactcatctcaaagtccatcacctcaggaaaat
gggaatcagactagtacctttacctcccagaactcagcttgtgactcttcaaactctgtc
tttcaagaacataatgagtattaccactattcagacataggagagacagtgcatggagac
acaaacagcactttaaactataactcttcccttatggaactaagagaaatgccatgcatt
ttaccacctgtgacttcttataatcaggccagccactggaaggactccagttgtaaccct
aacatagtgcataaccctttcctgattaatacagaatcaaggaatgtggctggtaactcc
tttcaaaaccaaaatgattcagagtcagatgtcttttatttggatctaacacaaatgaac
tgtgaaaacataatatcaccaattgacactcagaagagagttgcccctaattttataaat
tacaagaaaaaaggaacacatgatgcaaaaggacctataaatatagaagtgtctgcccct
aacttttcactagaaggctccccatctcctcttccctggaactttaagaaaaatgtatgg
gaacagcagaatcactcattcaacttagaatatgatgcaggggagactacatgtgacaaa
tggtactctcagaaagataatttaatcactaatcagcaaaaatgtctatcggatgagtta
gaaggcttcatatgtgaaagttcaaatgctgggactaaaaagaccttctggaaagaatta
ccatctgtccccagtttggatttattttgtgcttccgatcctaatgtaaatcaaaaagaa
ttcagcagtcttcgtttccaccaaagagctggaaaatgttcaggacagaaaaggcactct
gaatcctcacctaactcaggaggcatgaaatcgttaccagatttcatgtgctcacaacta
ccaaaattcaaaaaacgacgtctagtgtatgaaaaagtccctggtagagttgatggacaa
actcgtctgaggtttttttga
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integrated database retrieval system
