Ursus americanus (American black bear): 123803967
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Entry
123803967 CDS
T07931
Symbol
DICER1
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123803967 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
uar03036
]
123803967 (DICER1)
Chromosome and associated proteins [BR:
uar03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123803967 (DICER1)
microRNA pathway
RISC loading complex
123803967 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123803967
NCBI-ProteinID:
XP_045671781
LinkDB
All DBs
Position
Unknown
AA seq
1924 aa
AA seq
DB search
MNDKPCFAALSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHN
TIVCLNTGSGKTFIAVLLTKELSYQIRGDFSRNGKRTVFLVNSANQVAQQVSAVRTHSDL
KVGEYSNLEVNASWTKEKWNQEFMKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHL
AILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATD
LVVLDRYTSQPCEIVVDCGPFTDRSGLYGRLLLELEEALNFINDCNIPVHSKERDSTLIS
KQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALC
EEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDD
EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI
TGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL
PTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGEP
DVEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELP
DGTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKET
VKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTT
PLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLS
LQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMED
IEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSK
FPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEK
RKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAG
VGVRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSADNDNYCKHSTIVVPENAARQGAN
RTSSLENHDQMSVNCRALFSESPGKLQIEVSTDPTAINGLSYNKNLANGSYDLANRDFCQ
GNQLNYYKQEIPVQPTTSYPIQNFYNYENQPKPSDECTLLSNKYLDGNANKSTSDASPMT
ATTPGTTEAVRALKDRTGSEQSPCPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEML
GDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPV
NWLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDFEEDDEEEEEELTWRAPKEDDD
EDDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSPLGSMPFSSDF
EDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKS
IADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAVCPARENFSSQQKNLS
GSRAPASAAGSRSSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFK
NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA
LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK
EEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELL
EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQ
VPNS
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaagccctgcttcgcagccctcagcatggcaggcctgcagctcatgacccct
gcctcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgat
aacatttatacgccaagaaaatatcaggtggaactgcttgaagcagctctggatcataat
accatagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaa
gagctgtcctatcagatcaggggagacttcagcagaaatggaaaaaggacggtgttcttg
gtcaactctgcaaaccaggttgctcagcaagtgtccgctgtcagaactcattcagatctc
aaggtcggggaatactcaaacctcgaagtaaacgcatcttggacaaaagagaaatggaac
caggagtttatgaagcaccaggttctcgttatgacttgttatgtcgccttgaatgttttg
aaaaatggttacttatcactgtccgacattaaccttttggtgtttgatgagtgtcatctt
gcgatcctagaccacccctaccgagaaattatgaagctctgtgagaattgtccatcgtgt
cctcgtattttgggactaactgcttccattttaaatgggaaatgcgatcctgaggaattg
gaagaaaagattcagaaactggagaagattctgaagagtaacgctgagaccgcaactgac
ctggtggtgttggacagatacacttctcaaccgtgtgagatcgtggtagactgtgggcca
ttcacggacaggagtggcctctatggcagactgctgttggagctagaggaagcacttaac
tttatcaacgactgtaacatacctgtgcattcgaaagagagagattctactttaatttct
aaacagatcctctcagactgtcgtgcggtattggtggttctgggcccctggtgtgcggat
aaagtagccggaatgatggtgagagaactgcagaaatacatcaaacacgagcaagaggag
ctgcacaggaaatttctattgtttacagacaccttcctaaggaaaatacatgcactgtgt
gaagagcacttctctcctgcctcacttgacctgaaatttgtgactcctaaagtaataaaa
ctgcttgaaatcttacgcaaatacaaaccgtacgagcgacagcagtttgaaagtgttgag
tggtataataataggaatcaggataattatgtgtcttggagtgattctgaggatgacgat
gaggatgaagaaattgaagaaaaagaaaagccggagacaaattttccttctccgtttacc
aatattttatgtggaatcattttcgtggaaagaagatacacggccgttgtcttaaacaga
ttgataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttata
actggacatggcattggaaagaatcagcctcggaacaaacagatggaagcagaattcaga
aaacaggaagaggtccttaggaaatttcgagcacatgagaccaacctcctcattgcaaca
agtattgtggaagagggtgttgatataccaaagtgcaacttggtggttcgatttgatttg
cccacagagtatcgatcctatgttcagtctaagggaagagcaagggcaccgatctctaat
tatataatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatac
aaagctattgaaaagatcttgagaaacaagtgttccaagtcagttgacactggagagcct
gacgttgaacctgtcgtggatgatgacgatgtgttcccaccatacgtgttgaggcccgat
gatggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgct
agattaccaagtgatccgtttactcatctagctcctaaatgtaggacccgagagttgcct
gatggtacattttattcaactctttatctgccaattaactcacctctccgagcgtccatt
gttggtccaccaatgagctgtgtccgattggccgaaagagttgtagctctcatttgctgt
gaaaaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagagact
gttaagtacgaagaagagctcgatttacatgatgaagaggagaccagcgttccaggaagg
ccgggttccaccaagcgaagacagtgctacccaaaagcgattccggaatgtttgagggat
agctaccccaaacccgatcagccctgttacctgtacgtgataggaatggttctgacgaca
cccttacccgatgagctcaactttagaaggcggaagctctatccccctgaggacaccaca
agatgctttggaatactgacagccaaacccatacctcagatcccgcacttccctgtgtac
acgcgctctggagaggtgaccatatccattgagttgaagaagtctggtttcacgttgtct
ctgcaaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcgg
cttgagaaacctgcactagaatttaaacccacagacgctgattcagcatactgtgttcta
cctcttaatgttgtgaatgactccagcactttggacattgacttcaaattcatggaagat
attgagaagtctgaagctcgcataggcattcccagtacaaagtattcaaaagaaacaccc
tttgtttttaaattagaagattaccaggatgcagttatcattccaagataccgtaatttc
gatcagcctcatcgattttatgtagctgatgtgtacactgatctcaccccgctgagtaaa
tttccttcccctgagtatgaaactttcgcagaatattataaaacaaaatacaaccttgac
ctgaccaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatctt
ttgacacctcgccatttgaatcagaaggggaaagctcttcctctaagcagtgctgaaaag
agaaaagccaagtgggaaagtctgcagaataaacagatactggttccagagctctgtgct
atacatccgattccagcgtcactgtggagaaaagcagtctgtctccctagtatactctat
cgccttcactgccttttgactgcagaggagctaagagcccagacggccagcgatgctggc
gtgggagtccgatcccttcccgtggattttagataccccaacctagacttcgggtggaaa
aaatctattgacagcaaatctttcatctcaattgctaactcctcttcagctgacaatgat
aattactgtaagcacagcacaattgtagtccctgaaaatgctgcacgtcaaggtgctaat
aggacctcctctctagaaaatcatgaccaaatgtctgtgaactgcagagcgttgttcagt
gagtcacctggtaagctccaaattgaagtttcaaccgatcctacagcaattaatggtctt
tcttacaataaaaatcttgccaatggcagttacgatttagctaacagagacttttgccaa
ggaaatcagctgaattactacaagcaggaaatacctgtacaaccaactacctcatatccc
attcagaatttctacaattatgagaaccagcccaagcccagcgatgaatgtactctactg
agtaataaataccttgatggaaatgctaacaaatctacctcagatgcaagtcccatgaca
gccacgacgcctggtactaccgaagctgttcgagcgctcaaggacaggacgggttctgag
cagagcccgtgtcccgggtactcctcgaggaccctcggccccaatcctggacttattctg
caggctttgaccctttccaatgctagtgatggatttaacctggagcggcttgaaatgctt
ggtgactcctttttaaagcacgccatcaccacgtatctattttgcacttaccctgatgct
cacgagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtatcgg
cttggaaaaaagaagggactgcccagccgcatggtggtatcaatatttgatccccctgtg
aattggcttcctcctggttatgtagtaaaccaagacaaaagtaacacagataagtgggaa
aaagatgaaatgacaaaagactgcatgttggctaatggcaagctggacgaggactttgag
gaggacgacgaggaggaggaggaggagctgacgtggagggctccgaaggaggacgacgac
gaagacgatttcctggagtatgatcaggaacatatcaaatttatagataacatgttaatg
ggatcaggagcgtttgtaaagaaaatttctctttctcctttttcaaccactgattctgca
tacgaatggaaaatgcccaaaaaatccccgttaggtagtatgccattctcatcagatttt
gaggattttgactatagctcttgggatgcaatgtgctatctggatcctagcaaagctgtt
gaagaggatgactttgtggtggggttctggaatccatccgaggaaaactgtggtgttgac
acagggaagcagtccatttcctacgacttgcacacggagcagtgcatcgcggacaagagc
atagccgactgcgtggaggccctgctgggctgctatctaaccagctgcggcgagagggct
gcgcagcttttcctctgctcgctggggctcaaggtgctcccggtgatcaaaaggactgac
cgggaaaaggccgtgtgccctgctagggagaatttcagcagccaacaaaagaacctttca
gggagccgtgctcctgcctctgcggccggctcgcgctcctccgtgttgaaggacttggag
tacggttgtttgaagattccaccaagatgtatgtttgatcatccagacgcagataaaaca
ctgaatcaccttatatcgggttttgagaatttcgaaaagaaaatcaactacagattcaag
aataaggcgtacctgctacaggcttttacccacgcgtcctaccactacaacaccattact
gattgttaccagcgcctggagttcctgggagatgcgattttggactacctcataaccaag
cacctttacgaagacccgcggcagcactccccgggcgtcctgaccgacctgcggtccgcg
ctggtcaacaacaccatcttcgcgtcgctggcggtcaagtacgactaccacaagtacttc
aaagccgtctcccctgagctcttccacgtcatcgacgacttcgtgcagttccagctggag
aagaacgagatgcagggcatggactccgagcttaggaggtctgaggaggatgaagagaag
gaggaggacatcgaagttccaaaggcaatgggggacatttttgagtcgcttgctggtgcc
atttacatggacagcgggatgtccctggagacggtgtggcaggtgtactatcctatgatg
cggccgctaatagaaaagttttctgcaaacgtgccccgttcccctgtgcgagaattgctc
gaaatggaaccagaaactgccaaatttagcccggctgagaggacgtatgacggcaaggtc
agagtcacggtggaagtggtggggaaggggaagtttaaaggcgtcggccggagctacagg
atcgccaagtctgcagcagcaagaagagccctacgcagcctcaaagccaatcaacctcag
gttcccaacagctga
DBGET
integrated database retrieval system
