Ursus americanus (American black bear): 123804059
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Entry
123804059 CDS
T07931
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03020
RNA polymerase
uar03420
Nucleotide excision repair
uar05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123804059 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
123804059 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
123804059 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uar03021
]
123804059 (POLR2B)
03400 DNA repair and recombination proteins [BR:
uar03400
]
123804059 (POLR2B)
Enzymes [BR:
uar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123804059 (POLR2B)
Transcription machinery [BR:
uar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123804059 (POLR2B)
DNA repair and recombination proteins [BR:
uar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123804059 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123804059
NCBI-ProteinID:
XP_045671930
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcaccccagac
ttgtggcaagaagcatgctggattgtaatcagttcctattttgatgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gacgctccacccatagatctacaagccgaagcgcagcatgctagtggagaagttgaagaa
ccgccaagatatttgctgaagtttgagcagatttacctctccaaacctacccattgggaa
agagatggtgctccttcaccaatgatgccaaatgaggccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagtcattaaagaaggtgaagaacaactt
caaactcaacatcagaaaacttttataggaaaaattccaattatgttgcgttcaacttat
tgcctcttgaatggcttaacagatcgtgatctttgtgagttaaatgaatgtcccttggat
cctggtggatatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacagtctatgtatttgccaaaaaggattctaaatacgcctacacaggagag
tgtagatcatgtctggagaattcttcccgacccactagtactatttgggttagcatgttg
gcaagaggaggacagggtgcaaagaagagtgctattggtcagcgcattgtggcaacccta
ccgtatatcaagcaggaagttcccatcatcattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gtgaaaccttctctcgatgaagcttttgtcatccaggaacagaatgttgcactaaatttc
attggctcaagaggggcaaagcctggtgtcactaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgctccctcatgttggtgtcagcgacttttgtgagaccaaa
aaagcttatttcttggggtacatggttcataggttacttctagcagccttgggtagaaga
gaattagatgacagggatcactatggaaacaaaaggttggatcttgctgggccactgctt
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtacggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggagttggcaattaaaacaaggattata
tctgatggtctaaaatattctttagctacgggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaaccgcctgacttttgcatctactctttct
cacctacgtcgtttaaattcacctattggtagagatggcaagctagcaaaaccaagacag
ttgcataatacattgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagttggatctcaaccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaagatcct
gaacaacttatgaacaccctaaggaaattgcggcgtcagatggacatcattgtgtctgaa
gtttctatgattagagatattcgagaaagggagattcggatctatacagatgcaggccgt
atttgtaggccacttctgattgtagaaaaacaaaaactacttttgaagaagagacatatt
gatcagttgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtagaatatattgatactttggaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttccacatacacacactgcgagattcatccc
tcaatgattcttggtgtctgtgcatctattattccctttcctgatcataaccagtcccct
agaaacacatatcagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggatacactggcccatgttctgtattatcctcaaaaaccacttgtgacc
acacggtctatggaatatctacgatttagagagctgccagcaggtatcaactccattgtg
gccattgcgtcatacacgggatataaccaagaagactctgttatcatgaatcgttcagct
gtagacagaggctttttcaggtctgtcttctatcgatcatataaagaacaggaatctaaa
aaaggatttgatcaagaagaagtttttgagaagccaactcgtgaaacatgccagggtatg
aggcatgccatttatgacaagctggacgatgatggtttgatagctcctggagtccgtgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagggcactaatagacgctataccaagagagattgtagcaccttcctgagaactagtgag
acgggcattgtggatcaggttatggtaactctcaatcaggaaggatataaattttgtaaa
ataagggtccgctctgttagaattccacagattggagataaatttgctagtcgacatggt
caaaagggtacttgtggtattcagtacagacaagaggatatgcctttcacctgtgagggt
atcacccctgatatcatcataaatccccatgccattccctctcgcatgactattggtcac
ttgattgaatgtcttcaagggaaggtgtcagctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatctattatctgattatggctac
catcttagaggaaatgaggtcctgtacaatgggttcactggtcgaaaaatcacatcacag
atttttattggtcccacatattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccaggggaccgattcagatccttaatagacagcccatggagggtagatctcgt
gatggtggcctgcgttttggagaaatggaacgggactgtcaaattgcccatggagcagcc
cagtttttaagggaaagattgtttgaggcatcagatccatatcaggttcatgtctgcaat
ctttgtggaataatggcgattgctaacacaaggacccatacgtatgaatgccggggctgc
cgcaataaaacccagatttctttggtgcgaatgccttatgcgtgcaaactgctgtttcag
gaactgatgtctatgagtattgcacctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
