Ursus americanus (American black bear): 123804085
Help
Entry
123804085 CDS
T07931
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
uar
Ursus americanus (American black bear)
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
uar04990
]
123804085 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
uar04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
123804085 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
123804085
NCBI-ProteinID:
XP_045671997
LinkDB
All DBs
Position
Unknown
AA seq
1653 aa
AA seq
DB search
MACPALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLRESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSSASYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFSYPETIEEEGSEVGSPCEEDPVGPVDPGGKPSDGGLELPTGSGQEQPPP
EGAVVAPAPKSQEKDAVEIQKRRRLEQAGIKVLPAAQRFASHKQLSNEKEAVRGVVLRKE
NPFLTHQRGKDSESEEEIRCRRPDLEKDDFAARRARMNQTKPAVPLNQLLYGPFRKRETE
KSESSKQLSKGISEKKSLEYKRNQGQTEEVKSVVTCITRTQESEPAEEGVRKVPDLYRDD
LAQRRIQGHLTPHREAPRFVTVSDITEADLETWERLKVSGKTRDGDVEPIRAPEPSPEIK
AETAIRDDFASRKARACQKASSPRQKFVHFGPVTDIDQQRWKRLSIGQAGPREDIQEVLS
RGSETEKDSLSPSSTATASLAKDQTLKPQNDHRIVNSGIDDYCKRVSRLAPVLETQEEHV
CGLSERPGTEEATCKQLPQDGKEEKEGVAQRESEMPPKTARSEESGQPLLCPPASERKTL
GTEESSEKMTAPAWSGGGLKGQGKLYDSQKDDMMVRRTGMSLRRVGANVNQFLPVPFAKR
QDVEESAKGPPLKDKRYGPRTPVSDDAESTSMFDMRCEEEATVQPHSRARQEQLQLINNQ
LREEDDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIV
QEKERRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNL
TPFLNDPSPMKYLRRQSLPPPKFTATVETTIARTSVLDTSMSAGIGSPSKTVTPKAVPML
TPKPYSQPKNSQEVLKTFKVDGKVSMNGETVHGDKEKEKEGPTVALAPSLTKSQMFEGVA
RVHGAPVELKQGNNSIEINIKKPNSVPQELRATTEETEPNSQEDENDGEKTQKGNTELAS
SEPQHFTTTVTRCSPTVPFVEFSSSPQLKNDVPEEKDQKKLENEMSGKVELVLSQKVVKP
KSPEPEATLTYPFLDKMSETNQLHLPNLCSQDSPGPASIPLRVQNSWRRSQFFSQSVDSP
GSEKSPVTTPQFKFWAWDPEEERRRQEKWQQEQERLLQERYQKEQNKLKEEWEKAQKEVE
EEERRYYEEERKIIEDTVVPFTLSSSSADQLSTSPSVTESSGKVNKMDLENCREEEQETR
QKKPLQGNNNDLMLKPRENHPLEEMGSLTQGASAHSKNPVSKGVHQDHQLDTETGAPHRG
MNSQLAQDPSQNQQVSNPSMHILEDVKPKTLPLDKNINHQIESPSERRKKSPRENFQAGH
LSPCSPTPPGQSPNRSISGKKLCSSCGLPLGKGAAMIIETLHLYFHIQCFRCGICKGQLG
DAVSGTDVRIRNGLLNCNDCYMRSRSAGQPTTL
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccgctctgggtctggaagctcttcagcctctgcagccggagccgcccccc
gagcctgctttttctgaggcgcagaagtggatcgagcaagtgaccggcagaagttttggt
gataaagattttcggacagggttagaaaatggaatccttctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcgggattggac
aatatcatcttgttcttgagaggttgtaaagagcttggccttagagaatctcaacttttt
gaccctagtgacctacaggatacgtccaacagagtaacagtcaagagccttgattacagt
aggaaactgaaaaatgtattagttaccatttactggctggggaaagcagcaaacagttct
gcgtcctatagtggaacgaccctgaacctgaaggagttcgaaggcttgctggctcagatg
agaaaggagactgatgacattgagagtcctaaacgtagtatccgagacagtggctacata
gactgctgggattctgagcgcagcgactccctgtctccccctcgccacggcagagatgat
tccttcgacagcctggattccttcggctcccgctcccggcagaccccttccccagatgta
gtcctcaggggaagcagtgatgggagaggaagtgactctgaatccgacttgccacatcgg
aagctgccagatgtgaagaaggatgacatgtctgcgaggcggacttcccatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaatcagacggcctacgtc
cccgctcctctgagaaagaagaaagcagagcgagaggaatatcggaagagctggagtact
gccacctcccccctgggtggggagaggcccttcagctatcctgaaacaatagaggaagag
ggaagtgaagtggggtctccttgtgaagaggacccagtcggcccagtggatcccggtggg
aagccttctgatggtgggttagaattacccactggcagtggtcaggagcagcctcctcca
gagggggctgtggtggcaccagctcccaagtctcaagaaaaagatgctgtggaaatccaa
aagcgcagaaggctagagcaagctgggatcaaggtcctgcccgcggcacagcgctttgcc
agtcacaagcaattaagtaatgagaaagaagctgttcgtggcgttgtccttcgcaaagaa
aaccctttcctgacccaccaacgtggcaaagattcagagtcagaagaggaaattcggtgt
cgacggccagatcttgagaaagatgactttgctgcaaggagagcaaggatgaaccagacc
aagccagcagtgccattgaaccagctcctctatgggcctttccgaaaaagagagacagag
aaatcagagagcagcaaacagctctcaaagggaatttcagaaaagaaaagtctagaatat
aaaagaaaccagggccaaacagaagaggtgaagtcagtggtgacatgtattactcggact
caggagagcgaaccggcagaagagggagtgaggaaggtgccagatctttacagggatgac
ctggctcagcggagaattcagggccacctcacccctcaccgagaggctccaagatttgtc
acggtctccgatatcaccgaagctgacttggagacgtgggagagactgaaagtgtcagga
aagacgagggacggagatgttgaacccatccgcgcccctgagccttcaccagaaattaaa
gcagaaactgccattcgtgatgattttgccagccgcaaggccagggcctgtcagaaagct
tccagcccacggcagaagtttgtgcactttggacccgtgacagacatagatcagcagaga
tggaagcggctcagcatcggccaggctgggcctcgggaggacatacaagaagtcctcagt
cgtggcagcgagactgaaaaggactctctctccccttcctccacggccacggccagttta
gcaaaagaccaaacgcttaagccacaaaatgaccacagaatagtgaattctggcatagat
gactattgcaaaagagtctcgcgcctggctcctgtgctggagacccaggaggagcacgtc
tgcggtttgagcgagcgcccaggcacagaggaagcgacgtgcaaacagctgccacaggat
ggcaaagaagagaaggaaggagttgctcaaagagaatctgagatgccgccaaagactgca
agatccgaggagagcggccagccacttttgtgtcccccggcctctgaacgcaagactttg
gggacagaagagagctcggagaagatgacagctcctgcctggagtggcggtggactgaaa
ggccaaggaaagttgtatgattcacaaaaagatgacatgatggtcaggagaaccgggatg
tctcttagacgcgttggagccaatgtaaaccagttccttccagttccatttgcaaagcga
caggatgtggaggaatctgccaagggtcctccattgaaagataagagatacggtccgaga
actcctgtgtctgatgacgcagagagcacgagtatgtttgacatgcggtgtgaggaggag
gccacggtgcagccacacagcagggcccgccaggagcagctgcagctgataaataaccag
ctgcgggaagaggacgacaaatggcaagatgacctggctcgttggaagagccgtagaaga
agtgcttctcaggacttaatcaagaaagaggaagaaaggaagaaaatggagaagttactg
gctggagaggatggaacaagtgaacgaaggaaaagcatcaaaacctacagagaaattgtt
caagaaaaagagcggagagagagggagttgcatgaggcctataagaacgcacggtcccag
gaggaggcagaggggatccttcaacagtacattgagaggttcaccatcagcgaggctgtt
ctcgaacgcttggagatgccaaaaattctggaaagaagccattccacagagccaaattta
acccccttcctgaacgaccctagccccatgaagtacctgcggcgacagtcactgccccca
cccaaattcactgccaccgtggagaccaccatcgctcggaccagcgttctggataccagc
atgtcagcaggcattgggtctccaagcaaaactgtcacccccaaagcagtgcctatgctg
acacccaagccttactcccagcccaaaaactctcaagaggttctgaagacctttaaggta
gatgggaaagtcagcatgaatggagaaacagttcacggtgacaaggagaaggagaaagaa
ggtcccacagtggcacttgccccctcgttaaccaaatcccagatgtttgaaggcgtggcc
agagtgcatggggcgccagtggagctcaaacaaggcaacaatagcattgagatcaacata
aagaagccaaattctgttccccaagaactgagagcaaccactgaggaaactgaaccgaac
agtcaagaggatgagaatgatggcgaaaaaacccagaaagggaatacagaacttgcctca
tcagagccccagcattttacaacaactgtgactcgatgcagcccgaccgtgccctttgtg
gagttttcctccagcccccaactgaagaacgatgtgccagaagaaaaagaccagaagaaa
ctggaaaatgagatgagtggaaaggtggagttggtgttgtcacaaaaggtggtaaagccc
aaatcaccagaaccggaagcaaccctgacgtatccatttctggacaaaatgtctgaaacc
aaccagttacatttgccaaatctctgttctcaagactcccctggccccgccagcatcccg
ctgagagttcagaactcttggcggcgttcccagtttttctcccagtcagtggattctcca
ggcagtgaaaagtcacctgtaaccacacctcagtttaagttctgggcatgggacccagaa
gaggagcgccggcgacaggaaaaatggcaacaggagcaggaacgtttgctccaggagaga
taccagaaggaacagaacaagctgaaagaagagtgggaaaaggcccagaaggaggtggaa
gaggaggaacgcagatactatgaggaggagcgcaaaataattgaagacaccgtggttcca
tttactctttcttcaagttctgcagaccagctgtctacgtccccctctgtgactgaaagc
agtgggaaggtgaataagatggacctggaaaactgtcgagaggaagaacaggaaacaaga
cagaagaaaccactccaggggaacaacaacgatttaatgcttaagcctagggaaaatcat
ccgctagaggaaatgggcagcctaactcaaggggcctcagctcattctaagaatcctgta
tcaaaaggagtccatcaagaccatcagctggatacagaaactggggccccacaccgtggg
atgaactcacagctagctcaggatccatcccagaatcagcaggtatcaaacccatcaatg
cacattttagaagatgtgaagccaaaaaccctccctttggataaaaacattaaccatcag
atcgagtctccgagtgaaagacggaagaaaagccctcgagagaatttccaggctgggcac
ttgtccccctgttctcccacccctcccggccaatcaccaaacaggtctatcagtgggaag
aagctatgctcgtcctgtgggctccctctgggcaaaggagctgccatgatcatcgagacc
ctccatctctacttccacatccagtgctttaggtgtggaatttgtaaaggacagcttgga
gatgcagtgagtgggacggatgttaggattcgaaatggtcttctaaactgtaatgattgc
tacatgcgatccagaagtgctggccagcccacaacattgtga
DBGET
integrated database retrieval system
