Utexia brackfieldae: RHO15_01105
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Entry
RHO15_01105 CDS
T10516
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ubr Utexia brackfieldae
Pathway
ubr03410
Base excision repair
ubr03430
Mismatch repair
ubr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ubr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHO15_01105 (recJ)
03430 Mismatch repair
RHO15_01105 (recJ)
03440 Homologous recombination
RHO15_01105 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ubr03400
]
RHO15_01105 (recJ)
DNA repair and recombination proteins [BR:
ubr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RHO15_01105 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RHO15_01105 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RHO15_01105 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WVD64142
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Position
complement(257188..258918)
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AA seq
576 aa
AA seq
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MNITLKQRELSAVNPQFSDDTHPLLQRLYLLRGIDSDEELVRSAKGLLTYQLLTGIEQGI
AILYQAITTDANIIIVGDFDTDGATSTALMIKALRSLGLNHVNYIVPDRFMDGYGLGENV
VRRAAAQQAALIITVDNGVSSHAGVALAHQLGIKVIITDHHLPPAQLPEADAIINPNLTD
CAFPSKSLAGVGVAFYFILALRAYLRQLNWFSQQGLAEINMANLLDLVALGTVADVVTLD
KNNRILVHQGISRIRSGYGCVGIKALIDIAKKDCRKLSAMDLSYILAPRLNAAGRMETMS
LGIELLLCDDPIRAKQMAQELDLLNNERRDVEQSMQTEAVAYVELIEQSLPDIPQGIVIY
HPEWHQGVIGILSARIKDRYYRPVISFAQAGDGVLKGSGRSINGFHLRDALERIDSLNPG
LIDCFGGHAMAAGLTISEDKFSDFKHCFEQIAHQMIDENLLNHVVLSDGELAGELFTCDT
ARLIQDGGPWGQGFPEPLFDGGFRLHQQRIVGEKHLKVVVEPIQGGPLIEGIAFNIDIQQ
WPDQSVKTVKLAYHLDINEFRGKQTLQLLIRHLWPL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacattaaaacaacgcgaattatcagccgttaatccgcaattttctgatgat
acccatccgttattacagcgcctttacctgctgcgaggtatcgactcagatgaagaatta
gttcgtagcgcgaaagggttactcacctaccaattgcttaccggtattgagcaaggcatc
gccattttatatcaagccatcaccactgacgcgaacattatcattgttggcgattttgat
actgacggtgcaaccagcaccgcattaatgataaaagcgttgcgaagtttaggtcttaat
cacgtcaattatattgtaccggaccgttttatggatggctatggactgggcgagaacgtg
gtcaggcgcgcagcggcgcaacaagccgcgctgattatcacggtcgataatggtgtttca
tcccatgccggtgtcgctttagcgcaccagttaggcattaaagtgattattactgatcac
catctgccgccggcccagttacccgaggccgatgcgattattaatcccaacttaactgat
tgtgcatttccatctaagtcattagccggtgtcggtgtcgccttttattttattctggct
ttacgcgcttatttaagacagttaaattggttttcccagcaaggtctggctgaaatcaat
atggcgaatctgctggatttggtcgcattaggtacggtggctgatgtggtcacgctggat
aaaaataatcgtattttagtgcatcaggggattagccgaattcgcagtggttatggctgc
gtaggcatcaaggcgttaatcgatatcgccaaaaaagattgtcgtaaactctctgctatg
gacttaagttatattttagcgcctcgcttaaatgcggctggacgcatggagaccatgtct
ttagggattgagttgctattatgtgacgatccaatccgtgccaaacagatggcgcaagaa
ttagatttactcaataacgagcgccgggatgttgaacagtcaatgcagactgaagcggtg
gcgtatgttgagcttattgaacagagtttaccagatattccccaaggcattgtgatttat
catcctgagtggcatcaaggcgttattggtattttatcggctcgaatcaaagatcgttac
tatcgtccggtcatctcatttgcgcaggccggtgatggagtattgaaagggtctggacgt
tcaattaatggctttcatcttcgtgatgccttagagcgaattgactcgcttaatcctggt
ttaatcgactgttttggtggtcatgcgatggcagcaggcttaaccatttctgaagataaa
ttcagtgacttcaaacactgttttgagcaaattgctcatcagatgattgatgaaaactta
ttaaatcatgttgttttatctgatggtgaactggcaggtgaactgtttacctgtgacacc
gcccgtctcattcaagatggcggcccgtggggacaaggttttcctgaacctttatttgat
ggtgggtttcgattgcaccaacagcgcattgtcggtgaaaaacatttaaaagtggtcgtt
gaacccatacaaggtggcccactgattgaggggattgcatttaatattgatatccagcag
tggcctgatcaatcggttaaaacagttaaactcgcttaccatcttgatattaatgagttt
cgcggcaaacaaacattacagctgctgatcagacatctgtggccattataa
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