Utexia brackfieldae: RHO15_06265
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Entry
RHO15_06265 CDS
T10516
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ubr Utexia brackfieldae
Pathway
ubr00300
Lysine biosynthesis
ubr00470
D-Amino acid metabolism
ubr01100
Metabolic pathways
ubr01110
Biosynthesis of secondary metabolites
ubr01120
Microbial metabolism in diverse environments
ubr01230
Biosynthesis of amino acids
Module
ubr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ubr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHO15_06265 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHO15_06265 (dapF)
Enzymes [BR:
ubr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RHO15_06265 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WVD63084
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Position
1379263..1380087
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AA seq
274 aa
AA seq
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MNFSKMHGLGNDFVVIDAITQNVHLSPELIKRLAHRHTGIGFDQLLVVEPPYSPEHDFHY
RIYNADGSEVEQCGNGARCFARFVRLKGLTKKKQLKVSTQKGAIILTINDDESVRVNMGM
PVFEPQLVPFKATKEEKTYIIRAQERTIFCGVASMGNPHCVLQVDDVELAEVSVLGPILE
QHERFPEKANIGFMQIIDKKHIHLRVFERGVGETLACGTGACAAVAVGITQGLLAPQVEV
YLPGGTLNIEWLGPGQPLYMTGPATHVYDGFIVI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttctaaaatgcatggattggggaatgattttgtggtgattgatgccatcacg
caaaatgtccatttatcaccagaattgattaaacgactggctcatcgacataccggaata
ggttttgatcaactattagtggttgagccaccgtattcacccgaacatgattttcactat
cgcatttataatgctgatggtagcgaagttgagcagtgtggtaatggcgcgcgctgtttt
gcccgatttgtccgtttaaaaggcttaaccaaaaaaaaacaactcaaagtcagcacgcaa
aagggcgcgattatactcacaattaatgatgatgaaagtgttcgtgtcaatatggggatg
ccggtttttgaaccacaattagtcccttttaaagcgactaaagaggagaaaacctatatt
attcgtgcgcaggagagaaccatattttgcggcgtagcttcaatgggtaatcctcactgc
gtattgcaagtcgatgatgttgagttggcagaagtgagcgtgttaggaccgatattggaa
caacatgaacgcttcccagaaaaggccaatattggttttatgcaaattatcgataaaaaa
catatccatctacgtgtctttgaacggggtgtcggtgaaaccttagcttgtggtaccggc
gcgtgtgcggctgttgcagtcggtattacgcaaggtctgcttgcccctcaggttgaggtc
tatttacctggcggtacgctcaatatcgagtggctgggaccgggtcaaccactgtatatg
accggcccagctacccatgtttatgatggatttattgtcatatga
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