Utexia brackfieldae: RHO15_06385
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Entry
RHO15_06385 CDS
T10516
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ubr Utexia brackfieldae
Pathway
ubr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ubr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RHO15_06385 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ubr03400
]
RHO15_06385 (nfo)
Enzymes [BR:
ubr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RHO15_06385 (nfo)
DNA repair and recombination proteins [BR:
ubr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RHO15_06385 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WVD63107
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All DBs
Position
1409730..1410575
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AA seq
281 aa
AA seq
DB search
MKFVGAHVSAAGGVENAVLRAHEIGATAFALFTKNQRQWQAPPLTTASIDKFKQACETYH
YSPAQILPHDSYLINLGHPEAEALAKSRAAFLDEMQRCEALGLTLLNFHPGSDLKQIPVD
VCLARIAESINIVLAQTQQVVAVIENTAGQGSNLGYKFEHLAAIIEQVEDKSRVGVCLDT
CHAFAAGYDLRTEQACHQTFTEFANIVGFAYLRGMHLNDAKSEFASHVDRHQSLGKGNIG
ETAFRYIMRDSRFDGIPLILETIDDTIWPDEIAWLKSQMNA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgttggtgcccacgtcagtgcagcgggtggggttgagaatgcggtactcagg
gcccatgagatcggcgcaacggcgtttgcgttatttaccaagaaccagcgacaatggcaa
gcaccgccgctgaccactgccagtattgataaatttaaacaagcttgtgaaacctatcac
tattcaccggcacagattttgccgcatgacagctatttaattaacttaggtcatcctgaa
gcggaggcgctggctaaatcacgtgcggcctttttggatgagatgcagcgctgtgaagca
ttaggcttgacgttactgaatttccatccaggtagcgatctcaagcagattccggtcgat
gtctgtttagcccgcattgccgaatcgatcaatatcgtcttagcgcagactcagcaggtg
gtcgctgtgattgaaaataccgccggacagggctctaatttaggttataaatttgaacat
ttagccgccattattgagcaggtcgaggataaaagtcgggtcggggtctgcctcgatacc
tgccatgctttcgctgccggctatgatttacgtactgagcaagcctgccatcagaccttt
accgagtttgctaatatcgtgggttttgcgtatttacgcggcatgcatttaaatgatgcc
aagagcgaatttgccagccatgtcgatagacatcaaagtttaggcaaaggcaatattggc
gaaaccgcttttcgctatattatgcgtgatagtcgttttgatggcattccccttatttta
gagacgattgatgacacgatctggccagatgaaattgcctggttaaaaagccaaatgaac
gcttaa
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