Utexia brackfieldae: RHO15_10315
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Entry
RHO15_10315 CDS
T10516
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ubr Utexia brackfieldae
Brite
KEGG Orthology (KO) [BR:
ubr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ubr03016
]
RHO15_10315 (truB)
Enzymes [BR:
ubr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RHO15_10315 (truB)
Transfer RNA biogenesis [BR:
ubr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RHO15_10315 (truB)
Prokaryotic type
RHO15_10315 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WVD63841
LinkDB
All DBs
Position
complement(2273589..2274503)
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AA seq
304 aa
AA seq
DB search
MARRRNGRDIHGVLLLDKPTGMTSNDILQKVKRIYQANKAGHTGALDPLATGMLPICFGE
ATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVIQTRQINFTEAELSEALNQFRGPLKQ
VPTMFSALKYQGRPLYEYARQGLTVPREARDITVYELCFLRHEQDELELEIHCSKGTYIR
TIIDDLGEILGCGAHVIYLRRLQVSHYPQQKMITLEQLLEQQSDLDSLLAHLLPIDSPVQ
DYPILHISAVQGADILLGRTICILASAASERLVRIYAGSGSESHFLGIGLHALNQLAPKR
LVNL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagacgtcgtaatggccgtgatattcacggcgttttattattagataaaccgaca
gggatgacctctaatgatatcttacaaaaagtaaaacgcatttatcaagcgaataaggcc
ggtcatactggcgctttagatcccttagcaacgggtatgctccctatttgttttggtgag
gcaaccaagttttcccagtatttgcttgattctgataaacgttatcgcgtgatagccaag
ttaggtcagcgtaccgatacctctgatgccgatggacaagtgatccaaacgcgccagata
aatttcactgaagctgagctcagcgaggccttgaatcaatttcgagggccgctaaaacaa
gtgccgacgatgttttcagcgttaaaatatcaaggtagacctctttatgaatatgctcgt
caaggtctgactgttccccgtgaagcgcgcgatattactgtctacgaactctgttttttg
cgtcatgagcaagatgaattagaattagaaatccactgttcgaaagggacctatattcgt
actattatcgatgatctcggtgaaatactaggttgcggtgcgcatgttatctatttaaga
cgtttacaagtttcacactatccgcagcaaaaaatgattacccttgagcagttactggag
cagcagtctgatctggatagtttgctggctcatttattgccgatagatagtccggttcaa
gattatccaatactgcatatttctgctgtgcaaggtgcagatattttgctagggcgaact
atttgtatcttagccagcgctgccagtgagagattggtgcgtatttatgccgggagtggg
tccgagtcacactttttaggtatcggtctacacgcgcttaaccaactagcgccgaagcgt
ttagtgaatctataa
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