Undibacterium cyanobacteriorum: RF679_00095
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Entry
RF679_00095 CDS
T10254
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ucy Undibacterium cyanobacteriorum
Pathway
ucy03410
Base excision repair
Brite
Enzymes [BR:
ucy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RF679_00095
Transcription factors [BR:
ucy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RF679_00095
DNA repair and recombination proteins [BR:
ucy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RF679_00095
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WMW80695
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Position
20673..22130
Genome browser
AA seq
485 aa
AA seq
DB search
MQQHTEYYRAMVAKDPRFDGVFFAGIKTTGIYCRPICRVKTPRESSCLFFSSQAAAEAAG
FRPCLRCRPELAPYAIQQNLAHAIWRKIASGALNELSVEEFAEQIGLSSRQLRRVMLQEF
GVSPIELAQTQRLLFAKKLLQETNMPMIDVAFAAGFGSLRRFNALFEERYHMTPASIRRQ
SERVDDLLFLRLAYRPPLAWRELLVYLQGRAMNGIESIDLQAESYARTVQIGKHQGWIRV
QHLPDSQQLGLTVSHGLQPVLMPLIERVRNQFDLEANPTMVANHLQQEPILAAQIARTPG
LRVPGTFDVFELAIRAILGQQVSVAGATTVASRLVAQFGQPVVCDTLLPVGLSAHFPSPA
VLAEATVDQIAVLGMPGKRAATIIAFAQFAARGGLEFDPHCTLEDVVAELKTLPGIGEWT
AQYVAMRGLRFPNAFPAGDLGLQKAMVPGAEQRCTEKELWQRSQAWSPWRSYAALLLWQS
LSHHA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcacacggaatattatcgcgccatggtggcaaaagatccgcgtttcgacggg
gtcttcttcgccggcataaaaacgacgggtatctactgtcgtcctatttgccgcgtcaaa
actccgcgcgaatcgtcgtgcctgtttttttcctcacaagcggcggccgaggcggcgggt
tttcgtccatgcctccgttgccgccctgagttggcaccgtatgcaatacagcagaatttg
gcgcatgccatttggcgcaaaattgcgagtggtgctttgaacgaactgagtgttgaggag
tttgcagagcagatcggtttgtcttcacgtcaattacggcgtgtgatgctacaggagttc
ggtgtcagtccgattgagctggcacaaacccagcgtttgctgttcgccaagaagctattg
caggaaacgaatatgccgatgatcgatgttgcctttgccgcgggttttggcagcttacgg
cgctttaatgctttatttgaggaacgctatcacatgacgcctgcttcgatccggcgccag
tcggagcgcgtcgatgatctccttttcttgcgtttggcatatcgcccgcccttggcctgg
agggaactcttggtgtacttgcaaggccgtgccatgaacggtatcgagagtattgatttg
caggcggagagttacgcccgcaccgtgcaaataggcaaacaccaaggttggatacgtgtg
caacatttgccagatagtcagcaactagggttaacggtgtcgcatggattacagccggtt
ctgatgccattgattgaacgagtgcggaatcagttcgatctcgaagccaatccgaccatg
gtagcgaatcatttacaacaagaacccattttggcagcgcaaatcgcacgaacaccaggc
ttgagggtaccggggacatttgatgtatttgagctagcgattcgcgcgatcttaggacag
caagtaagtgtagccggagcgaccacggtggcgtcgcgtctagtggcgcaattcggtcag
cctgtggtttgcgatacgcttttgccggttggcttgagtgcgcatttcccaagtccagcg
gtcttggcggaagcgacggttgatcaaattgccgtgcttggtatgccaggcaaacgcgcc
gcaacgatcatcgccttcgcacagtttgcggcgcgcggcggtttagagtttgatccacac
tgcactttggaagacgtggtcgccgagcttaaaactttgccgggtattggtgagtggacg
gcgcagtatgtggcgatgcgcggtctgcgttttccaaacgccttcccagctggcgatctc
ggtttgcaaaaggcaatggtcccgggcgctgagcagcgctgcacggaaaaagaactatgg
caacgatcgcaggcgtggtcgccttggcgttcttatgcggccctgctgttatggcaatcc
ttgagtcatcacgcgtaa
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