Affinundibacterium cyanobacteriorum: RF679_00440
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Entry
RF679_00440 CDS
T10254
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ucy Affinundibacterium cyanobacteriorum
Pathway
ucy03030
DNA replication
ucy03430
Mismatch repair
ucy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RF679_00440 (dnaN)
03430 Mismatch repair
RF679_00440 (dnaN)
03440 Homologous recombination
RF679_00440 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ucy03032
]
RF679_00440 (dnaN)
03400 DNA repair and recombination proteins [BR:
ucy03400
]
RF679_00440 (dnaN)
Enzymes [BR:
ucy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RF679_00440 (dnaN)
DNA replication proteins [BR:
ucy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RF679_00440 (dnaN)
DNA repair and recombination proteins [BR:
ucy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RF679_00440 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
WMW80762
UniProt:
A0ABY9RHV4
LinkDB
All DBs
Position
107396..108502
Genome browser
AA seq
368 aa
AA seq
DB search
MQLVKTHRDTLLRPLQIVSGIVERRHTLPILANILIRKDGEKVSFLSTDIEVQITTHAEI
GSGGDVTATTVAARKLLDILRALPDDNDVTLKLDNKKMSVQSGKSRFSLQTLAAEEFPTV
AQAEHFNASVSLPQKALKHLFNMVHFSMAQQDIRYYLNGLLLVVDGKNVIAVATDGHRLA
YAQVQVEQEFARQEVIIPRKTILELQRLLEDKDDNVQVDIANNQVKLTFADIELISKLVE
GKFPDFNRVIPKGYKNNFTLGREKLLRSLQRVAIMTSDKFKGVRCVIEPGLMRILSTNAD
QEEAVEEIEIDYGGDSIDIGFNVTYLLDVLNNLKVDQINIALGDSNSSALLTIPENGDFK
YVVMPMRI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggtcaaaacccacagggataccctcttacggcccctgcaaattgtgagtggt
attgtcgagcgtcggcacactttgccgattctggccaatattctcattcgtaaagacggc
gaaaaagtgtcgttcttatcgaccgatattgaagtacaaatcaccacccatgcagaaatc
ggttctggtggcgatgtcactgcgaccacggtagccgcgcgtaagttgctcgatattttg
cgcgcactgcccgatgacaatgacgtcaccttgaagctcgacaataaaaagatgagcgtg
cagtctggtaaatcgcgcttctctttgcaaactttggcagcggaagaattcccaaccgtt
gctcaagctgagcatttcaacgctagcgtctccttgccacaaaaagccttgaagcacttg
ttcaacatggtgcatttctccatggcgcaacaagacattcgttactacttgaatggtttg
ttattggtcgtcgatggtaagaacgtgattgcggtcgcgaccgatggtcaccgtttggcc
tacgcacaagtgcaagtggaacaagaatttgcgcgtcaagaagtcatcattccacgtaaa
acgattttggaattgcagcgcttgctggaagacaaagacgacaacgtgcaagtcgacatc
gcgaataaccaagtcaagttgacctttgctgacatcgaattgatttcgaaattggtcgaa
ggcaaattccctgactttaatcgcgtgatccctaagggctacaaaaacaacttcaccttg
ggccgtgagaaattgctgcgctctttgcaacgcgtagcgatcatgacttcggataaattc
aaaggtgtacgttgcgtgatcgaaccaggtttgatgcgtattttgtcgaccaatgccgat
caagaagaagcggtcgaagaaatcgaaatcgattacggtggcgacagcatcgacatcggc
ttcaacgtcacgtatttgttggacgtgttgaataacctcaaagtcgatcaaatcaatatc
gctttaggtgattccaattcttccgcgttgttgaccatcccagaaaatggcgatttcaaa
tacgttgtgatgccaatgcggatttga
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