Undibacterium cyanobacteriorum: RF679_01515
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Entry
RF679_01515 CDS
T10254
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ucy Undibacterium cyanobacteriorum
Pathway
ucy00300
Lysine biosynthesis
ucy00470
D-Amino acid metabolism
ucy01100
Metabolic pathways
ucy01110
Biosynthesis of secondary metabolites
ucy01120
Microbial metabolism in diverse environments
ucy01230
Biosynthesis of amino acids
Module
ucy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RF679_01515 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RF679_01515 (dapF)
Enzymes [BR:
ucy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RF679_01515 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF4514
Motif
Other DBs
NCBI-ProteinID:
WMW80975
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Position
357422..358297
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AA seq
291 aa
AA seq
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MKLKFTKMHGAGNDFIVIDAINQTIAFSPEQWRYLADRRFGIGADQILVVEKAASSDIDF
RYRIFNADGGEVEQCGNGSRAFVRFVVDKGLTQKRSIRVQTMSGVIEPSIDAEGLITVNM
GVPDCRPSASHFNCEGLPQASQEEDTLWELPLAQGSVQVSSVSMGNPHAVQLVADAKLHP
VEVEGPQIERHSRFEKRVNAGFMQVITPRHIQLRVYERGAGETLACGTGACAAVVAGIRR
GLLQSPVQVDMRGGRLQIAWQGAGHPVLLSGPAVAVFEGEIEVPDVSAGLS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaattcactaaaatgcacggcgcgggcaatgatttcattgtgattgacgct
attaatcaaacgatcgcattcagtccggagcaatggcgctacctggcagatcgtcgtttc
ggtatcggcgcagatcagattctagtggttgagaaagcggcatcgtctgacattgatttc
cgttatcggatttttaatgctgatggtggtgaagtagagcaatgcggaaatggctcgcgc
gcttttgtgcggtttgtggttgacaaaggcctgacgcaaaaacgcagcatccgtgtacaa
acaatgtcgggtgtgattgaaccatcgatcgatgccgaaggtttgataacggtcaatatg
ggagtgccagattgccgacccagtgcttcacatttcaattgtgaaggcctgccgcaagcg
agccaagaagaagacaccttgtgggagcttcccttggcgcaaggaagtgtgcaagtttcc
agcgtctcaatgggaaatcctcatgctgtacaactcgtcgcagatgccaagctgcatcca
gtcgaggtcgaaggtccgcagattgagcgtcattcgcgatttgagaaacgcgtcaatgct
ggttttatgcaggtgattacccctcgccatattcaactacgtgtttatgaacgcggtgcg
ggcgagactctcgcctgtggcacaggcgcttgtgctgctgttgttgcagggattcgacga
ggattgttgcagtctccagtgcaggttgatatgcgaggcggtcgcttacaaattgcatgg
caaggtgcagggcatccggtcttgttgagtgggcctgcagtcgctgtatttgaaggtgaa
attgaggtgcctgacgtatcagcggggctaagttaa
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