Undibacterium cyanobacteriorum: RF679_03385
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Entry
RF679_03385 CDS
T10254
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ucy Undibacterium cyanobacteriorum
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ucy03000
]
RF679_03385
Transcription factors [BR:
ucy03000
]
Prokaryotic type
Helix-turn-helix
Other families
RF679_03385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
PAS_4
HTH_28
HTH_30
HTH_29
HTH_23
HTH_7
HTH_17
Mg_chelatase
HTH_20
AAA_2
HTH_Tnp_1
HTH_22
HTH_Tnp_ISL3
Xre-like-HTH
HTH_1
AAA_16
MerR
PAS
PAS_8
HTH_50
AAA
Motif
Other DBs
NCBI-ProteinID:
WMW81334
UniProt:
A0ABY9RKG4
LinkDB
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Position
810633..812669
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AA seq
678 aa
AA seq
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MRQHAILPAPHLKHARQQLLERGIAPQTSIDKRIADSWQRSHQAGLPHYGGSPCADNLDA
ISLNRARQRNYELIRHSQPIIDFLFEQVKQSQSMVVLADAQGVLMHTVGDLDFLSKAERV
ALRCGATWAEQQRGTNAIGTALAECNEIEVHGAEHYLETNEFLTCAAAPILSAQGNLLGI
LDISGDHRSRQAHTLGLVSTAVQMIENSMVLSPDRYPIVLQFHAQAAGIASVAQGILALS
EDGFVLGANRRALHLLGLRFADLSRLHWSQMFDLKLEEFLSQQTRRFATLVQFHTRLGKS
FFAQLHPHSQVLRTAAQQYSGKVIPAHSSSSHVDPQWQESLAKGRRVFERDIPLLLSGES
GVGKEVFAKQVHTGSTRQARHFAAVNCAAIPEHLIEAELFGYVPGAFTGALKQGSPGRIR
EADGGTLFLDEIGDMPLSLQTRLLRVLQERTVMPVGSGSAVPVDFRLICASHQNLREKVK
LGQFREDLFYRINGLQLQLPALRDRTDFAALCASILHEFSPQLTITFAPQIMQTLQSYSW
PGNVRQLRHCLRTATALLDDEETQIEWQHFAQDMLTEFGVLSGEHERDQAVTLPIKQKSF
NHGEATSTLEQNELAIGDVRANGFGANGLPSQFDDFPKLKTLSAQAIEHALRLTEGNVSE
AARRLGVSRQTLYRKMRE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaacacgcaattttgccagcgccgcatcttaaacatgcgcgccaacaattgctc
gaacgcggtatcgcgccgcaaaccagcatcgataagcgtattgccgattcctggcagcgc
agccatcaagcggggttgccacattatggtggaagcccatgtgcggataacctagatgcg
attagtttgaatcgcgctcgtcaacgcaattacgaattgattcggcattcgcagcccatt
attgatttcctctttgagcaagtaaaacaaagtcaatcgatggtggtcttggccgatgcg
caaggtgtattgatgcacacggttggcgacctcgatttcttaagtaaagctgaacgtgtg
gctttgcgttgtggcgccacctgggcggaacaacaacgagggactaatgcgattggcacg
gcactggcagagtgtaatgaaatcgaagtacatggggccgaacactatttggaaaccaat
gagtttttgacttgcgctgcagcgcccatcctttcagcgcaaggaaatctgctaggcatt
ttagatatttctggcgatcatcgtagtcgccaagcgcatactttagggctggtatcgacc
gccgtgcagatgatcgaaaacagtatggtcctcagtcccgatcgttaccctatcgttcta
caatttcatgctcaagcagcgggtattgcctccgttgcacaaggcatcttagcactctca
gaagatggcttcgtgttgggagccaatcgacgtgctttgcatctgctgggtttgcgcttt
gccgatctaagtcgattgcattggagtcagatgtttgacttgaagttagaagaatttctg
tcgcaacaaacgcgtcgcttcgcgaccttggttcaatttcatacccgccttggaaaatca
ttctttgcacaactgcatccacactcgcaagtgctgcggacggcggctcagcagtactca
ggcaaggtaatacctgcccacagctcgtcctcgcacgtcgatccgcaatggcaagagtct
ttagcaaaaggccgacgcgtttttgaacgcgatatcccgctcttattatcaggcgagtcc
ggggttgggaaagaagtgtttgcgaagcaggtgcatacgggatcgacgcgccaagcacgc
catttcgcagcggtgaattgcgcagcgattcctgagcatttgattgaggccgaattgttc
ggctacgtgcccggcgctttcactggcgccttgaagcaaggctcgccaggacgtattcgc
gaggcagacggaggtactttatttttggatgaaattggcgatatgcctttgagcttgcag
acgcgccttctgcgtgtattgcaagaacggacggtgatgccggtcggcagtggcagtgcc
gttccagtggactttcgtttgatctgtgccagccaccaaaatttgcgtgagaaggtcaag
ttaggacaatttcgcgaagatttgttttaccgcatcaatggtttgcaattgcagttaccg
gcgttacgtgaccgcactgattttgctgcgctctgcgccagcatcttgcacgaattttca
cctcagctcacgatcacgttcgcgccacagatcatgcaaacactgcagtcttacagctgg
cctggcaatgtaagacaacttcgtcactgcttacgtacggcaacggctttgttggacgat
gaggaaacacagatcgagtggcagcattttgcccaagatatgttgacggaatttggcgtt
cttagtggggaacacgagcgcgatcaagctgtcactcttccaattaagcaaaaatcattc
aatcatggtgaggcgacttcaacgcttgagcagaatgaattagcgatcggtgatgtgcga
gccaatggctttggtgccaacgggcttccctctcagttcgatgatttccctaaactcaaa
acactttctgctcaggcgatcgaacatgctttgcgtttgaccgaaggcaatgtctctgaa
gcagcccgtcggcttggcgtgagccgtcaaaccttgtaccgcaagatgcgtgagtga
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