Undibacterium cyanobacteriorum: RF679_09300
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Entry
RF679_09300 CDS
T10254
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ucy Undibacterium cyanobacteriorum
Pathway
ucy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RF679_09300 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ucy01007
]
RF679_09300 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ucy03016
]
RF679_09300 (lysS)
Enzymes [BR:
ucy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
RF679_09300 (lysS)
Amino acid related enzymes [BR:
ucy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RF679_09300 (lysS)
Transfer RNA biogenesis [BR:
ucy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RF679_09300 (lysS)
Prokaryotic type
Other AARSs
RF679_09300 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
TUG-UBL1
Motif
Other DBs
NCBI-ProteinID:
WMW82456
LinkDB
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Position
complement(2224774..2226303)
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AA seq
509 aa
AA seq
DB search
MSDQQTPAELPQDENSIIAERRAKLDAIRSKGVAFPNDFRPAHKAADLQAQYASSTREEL
EAQNVEVSVAGRMMLKREAGKKAAFATLQDASGVKADGRIQLYVTSDKTGEAEMEAFRHY
DLGDILGIEGVLFKTKTDELTIKVTKLRLLTKSLRPLPDKFHGLANQETKYRQRYVDLIM
SEETRRTFKARTAAMSSIRNFMNNHGFMEVETPMLHVIPGGAAAKPFITHHNALDMEMYL
RIAPELYLKRLVVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYKWLMDFTEE
VIRKAAIDAHGTAVLTYQGKELDLSKPFQRLTIVGAINKYAPHYTNEQLSDAEFLKTELL
KFGVKPFATAGLGALQLALFEETAEAQLWEPTYIIDYPAEVSPLARASDTVPGITERFEL
FMTGREIANGFSELNDAEDQAARFMAQVAAKDAGDEEAMYFDADYIRALEYGLPPTGGCG
IGIDRLMMLITDSPNIRDVILFPHLRREE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaacaaacaccagcagagttaccacaagacgagaattcaattatcgctgaa
cgtcgcgccaagcttgacgcgattcgtagcaagggtgtcgcattcccaaatgatttccgt
cctgcgcataaagctgctgatttgcaagcacaatatgcttccagcacacgcgaagagtta
gaagcacaaaacgttgaagtgtccgtggcaggtcgtatgatgctcaagcgcgaagctggt
aagaaagcggccttcgcaaccttgcaagatgcgtctggtgtaaaagccgatggacgtatt
cagttgtacgtcaccagcgacaaaactggcgaagccgagatggaggcgttccgtcattat
gacttgggtgacatccttggcattgaaggtgttttgttcaaaacgaagaccgatgaattg
accatcaaagtcaccaagctgcgcctgttgacgaagtctttgcgccctctgccggacaaa
ttccacggcttagcgaatcaagaaaccaaatatcgccaacgttatgttgatttgatcatg
agcgaagaaacacgtcgcacattcaaagcacgtacagcagcgatgagttcaattcgtaac
ttcatgaataatcacggtttcatggaagtggaaacaccaatgttgcacgtgattcctggt
ggtgctgctgctaaaccattcatcacacatcacaatgcgctcgatatggaaatgtatctg
cgtatcgctccagaattgtatttgaagcgtttagtggttggtggttttgaacgtgtgttt
gaagttaaccgcaacttccgtaacgaaggcgtatcgccacgacacaatccagaattcacg
atgatggaattctatgcggcgtatgttgattacaaatggttgatggacttcaccgaagaa
gtgattcgcaaagcagcgatcgatgcgcatggtactgccgtcttgacttatcaaggtaaa
gaattggatttgtctaagccattccaacgcttgaccatcgtcggtgccatcaacaaatat
gcaccgcactataccaatgagcagttgagtgacgcagagttcttgaagacagagttacta
aagtttggcgtgaagcctttcgccactgccggcctcggcgctttgcaattagccttgttt
gaagaaactgctgaagcgcaattgtgggaaccaacttacatcattgactacccagcagaa
gtgtcaccgctggcgcgtgcttcggataccgttcctggtatcacggaacgtttcgagttg
ttcatgacaggtcgtgaaatcgccaatggtttctctgaattgaatgatgcggaagaccaa
gcagcacgcttcatggcgcaagttgcagcgaaagacgctggtgatgaagaagccatgtat
tttgacgccgattacatccgtgctttggaatacggtttgccaccaaccggtggttgcggt
atcggcattgatcgtttgatgatgttgatcacagattcgcctaacatccgtgacgtgatc
ttgttcccgcacttacgtcgtgaagaataa
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