Undibacterium cyanobacteriorum: RF679_10565
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Entry
RF679_10565 CDS
T10254
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ucy Undibacterium cyanobacteriorum
Pathway
ucy03030
DNA replication
ucy03430
Mismatch repair
ucy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RF679_10565 (dnaX)
03430 Mismatch repair
RF679_10565 (dnaX)
03440 Homologous recombination
RF679_10565 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ucy03032
]
RF679_10565 (dnaX)
03400 DNA repair and recombination proteins [BR:
ucy03400
]
RF679_10565 (dnaX)
Enzymes [BR:
ucy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RF679_10565 (dnaX)
DNA replication proteins [BR:
ucy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RF679_10565 (dnaX)
DNA repair and recombination proteins [BR:
ucy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RF679_10565 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_18
DNA_pol3_tau_5
AAA_30
TsaE
AAA_5
AAA_2
Herpes_V23
nSTAND3
PIF1
AAA_assoc_2
Glyco_tranf_2_5
AAA_24
AAA_28
Rad17
AAA_19
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WMW79104
LinkDB
All DBs
Position
complement(2506680..2509106)
Genome browser
AA seq
808 aa
AA seq
DB search
MSYQVLARKYRPKSFATLVGQEHVVRALTHALDQQRLHHAYLFTGTRGVGKTTLSRILAK
SFNCEKGITSQACGECEACTAIDAGRYVDYIEMDAASNRGVDEMASLLEQAIYAPSNARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHIKFILATTDPQKIPVTVLSRCLQFNLKQMPP
GHIVGHLENILGQERIEFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVSLDSVQSM
LGALDQSYLIRLLQALLEEDGSALLTVADEMAARSLSYKSALQDLATMLHQIAVAQMVPN
ALAEDVPERAALLSLAEHFGKEEVQLYYQIAVHGRNEIGLAPDEYSGFSMTLLRMLAFRP
SKLPPLSGGSGGGSNMPPPSNRGPSNSGIHSAREAMQAAKSAAVAGPAVVRPQLSETVQA
PQSIAVASEAIDRPRIVADIVADSALQIAPQVLPVEASRIIDEVPNRSAVKSTSPSQSNP
QPDEFAGIRLPPVIAKTMDSVSTAETPKSGKLSPAMAALAAARAASGKPAATPIPSQSSN
AETTMPVAQAVTQGQARNALVEPTVKPHDPSPVVAHDRDTNGATKRVTATGLSKVEDEVM
PPWEEADFEGVELASMPPLKQKDFDESEYFQEASSLRVEEIAASSSAPSVNAPAQQVQVP
SVAAAPQQPLQLMPVSEIGWDGHWPNLAASLPVKGVAQQLAQQSELRQVSLSGGAVVFRL
CVPVQTLLSAGSVDKLLAALCDRFADSGHAIRIETEIGAVEQTANAQALAEKAARQQFAE
RAIQEDGFVQNLMREFGASLLAGSVRPI
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagttctcgctagaaaatatcgccccaaaagttttgccaccttggttggg
caagaacatgtggtgcgcgccttaacccatgcgttagatcaacaacgattgcaccatgca
tatttgttcactgggactcgtggtgtcggtaaaacgactttatcgcggatcttggcgaag
tcgttcaactgcgagaaaggtattacttcgcaagcttgcggagaatgcgaggcgtgtacg
gcgattgatgcggggcgctatgttgattatatcgagatggatgctgcctcaaaccgcggt
gtcgatgaaatggcttcgcttttggagcaagccatttatgcaccttcgaatgcacgcttt
aaagtctatatgattgacgaagttcacatgctgacgaatcatgcattcaacgcgatgttg
aagactttggaagagccgccgccgcatatcaaattcattttggctaccacagatcctcaa
aaaattccggtaaccgttttgtctcggtgtttgcaatttaatttgaagcagatgccaccg
ggacatatcgtcggacatttggaaaatattctcggacaagaacggattgagtttgagcag
ccggcattgcgcttgttggctcaaggcgcgcacggttcaatgcgtgatgcgctctcttta
acagatcaagcgattgcatatgcggctggcaaggtcagtttggattccgtgcaatcgatg
ctaggagcacttgatcaatcgtacttgattcgtttattgcaagctttgctcgaggaagat
ggcagcgctttgttaactgtcgccgatgagatggcggcacgtagtttgtcctataaatct
gcactgcaagatctcgccacgatgctgcatcaaatcgcggtggcgcaaatggtgccgaat
gctttggctgaggatgtgcctgagcgcgctgctttgttgagcctcgccgaacattttggc
aaagaagaagttcagctctattatcagatcgccgtgcatgggcgcaacgaaattggactt
gcccctgacgaatattcgggcttttcaatgactttgctgcgcatgttagctttccgcccg
agtaagttgccgccgctttccggtggttccggtggcggttcaaatatgccccccccatct
aacagaggtccaagtaattctggaattcatagtgcccgagaagcaatgcaagcggctaaa
agtgctgcagttgcaggcccggccgtagtgagaccgcagttgtctgaaacagttcaagcg
ccgcagtcgattgcggtcgcgagtgaggcaattgatcgccctcgtattgttgcggatatt
gttgcagattcagctttgcaaattgcgccgcaggtgctgcccgttgaggcaagccgaatc
attgatgaagttccgaatcgatccgcggtgaagtcaacttcgccatcgcagtcgaatcct
cagcctgatgagttcgcaggtattcgtctaccgccagtgattgccaaaacgatggactcg
gtgtcaactgcagagactccaaagtcgggtaagttgagtcctgcgatggcagcattagct
gctgcccgtgcagcgagtggcaagccggcagcaacaccaataccttcgcagagttctaat
gcggaaaccaccatgcccgtggcacaagcagtcacgcaagggcaggccagaaatgcctta
gtagagccgacagtaaagcctcacgatccatcgccggttgtggctcatgatcgcgacacc
aacggcgcgacgaaacgtgttacggcgactgggctgtcgaaagttgaggatgaagtcatg
ccgccatgggaggaggctgattttgaaggtgtggaattggcatcgatgccgccattaaag
cagaaagattttgatgaaagtgaatatttccaagaagcctctagcttgagagttgaagaa
attgctgcgtcatcaagtgccccttcggtaaatgcgcctgcgcagcaggtgcaagtccca
agtgtggctgcagcaccgcaacagccattgcagttaatgcctgtgagtgaaattggatgg
gatggtcattggcctaatttggccgcatctttgccagtgaagggggttgcccagcaattg
gcgcaacaaagtgaacttcgtcaggtctctttgagtgggggggcggtcgtgtttcgactt
tgtgttccggtgcagactttattgtcggcggggagcgttgataagttgttggcagcatta
tgtgatcgttttgctgactcgggacacgcaattcgcattgaaaccgaaattggcgccgtc
gaacaaaccgccaatgcgcaagcgcttgcagagaaggctgcgcggcagcaattcgctgag
cgagcgattcaggaagatggatttgtacaaaacttaatgcgagaattcggcgcttcgctg
ttggcaggaagtgtccgtccgatttga
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