Undibacterium cyanobacteriorum: RF679_12080
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Entry
RF679_12080 CDS
T10254
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ucy Undibacterium cyanobacteriorum
Pathway
ucy03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RF679_12080 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ucy03011
]
RF679_12080 (rpsA)
Ribosome [BR:
ucy03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RF679_12080 (rpsA)
Bacteria
RF679_12080 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
DUF5003
BON
CPSF73-100_C
Motif
Other DBs
NCBI-ProteinID:
WMW79386
LinkDB
All DBs
Position
complement(2848674..2850374)
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AA seq
566 aa
AA seq
DB search
MSQDFATGADSFAALFEESLSRQDMRSGEVISAEVVRIDHNFVIVNAGLKSEAFIPVEEF
KNDQGELEVNVGDFVSVAIESLENGFGDTILSRDKAKRLASWLALEKALESGEMVVGTVN
GKVKGGLTVLTNGIRAFLPGSLVDTRPVKDTTPYEGKTMEFKVIKLDRKRNNVVLSRRAV
VEASMGEERQKLMENLKEGTVVTGLVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSE
VLTVGQEITAKILKFDQEKNRVSLGVKQLGDDPWTGLARRYPANTRLFGKVTNLTDYGAF
VEVEQGIEGLVHVSEMDWTNKNVAPNKVVQLGDEVEVMVLEIDEERRRISLGMKQCKANP
WDDFSLNFKKGDKVKGAIKSITDFGVFIGLTGNIDGLVHLSDLSWNEAGEEAVRKFKKGD
ELEAIVLAIDVERERVSLGVKQLEGDPFNNYCAMNDKGATVTGTVKSVEAKGAVIQLADE
VEGYLRASEISRDRVEDAGTHLKVGDSVEALVLNIDRKARSIQLSIKAKDSAETQEAMQK
MSADSSAASGTTSLGALLKAKLDNKN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatttcgcaaccggtgctgatagcttcgccgctttgttcgaagagtccttg
tcacgccaagatatgcgttccggtgaagtgatttctgccgaagtcgttcgtatcgaccac
aatttcgtgatcgtgaacgcaggcctcaaatctgaagcctttatccctgttgaagaattc
aaaaacgaccaaggtgaattggaagttaacgtcggtgatttcgtatccgtagcgatcgaa
tcattggaaaatggtttcggtgacacaatcttgtcccgcgacaaagcaaaacgtttggca
tcatggctcgcgctcgaaaaagcgttggagtctggcgaaatggttgttggtacagtcaac
ggcaaagtaaaaggtggtttgacagttctcacgaacggcatccgcgctttcttgccaggt
tctttggttgacacacgcccagttaaggatacaactccttacgaaggcaaaacaatggaa
ttcaaagttatcaagctcgaccgtaagcgtaacaacgttgtgttgtcacgtcgtgcagtt
gttgaggcttctatgggtgaagaacgtcagaaattgatggaaaacctgaaagaaggcaca
gtggttactggcttggttaaaaacatcactgactacggtgcgttcgttgatttgggcggc
atcgatggcttgttgcacatcactgatttggcatggcgtcgtgttcgtcacccatctgaa
gttctcacagtgggtcaagaaatcactgcgaagatcctcaagtttgatcaagagaaaaac
cgtgtttctctcggcgttaaacaattgggcgatgatccttggacaggtttggcacgtcgt
tacccagcaaacacacgtttgttcggtaaagtaacaaacttgacagactacggtgcattc
gttgaagttgaacaaggtatcgaaggtttggtccacgtttccgaaatggattggacaaac
aaaaacgttgcaccaaacaaagttgttcagttgggtgacgaagttgaagttatggtattg
gaaatcgacgaagaacgtcgtcgtatcagcttgggcatgaaacagtgcaaagcaaatcca
tgggatgacttctctttgaacttcaaaaaaggcgacaaagttaaaggcgcgatcaagtcc
atcactgacttcggcgtgttcattggcttgacaggcaacatcgacggtttggtccacttg
tctgacttgtcttggaatgaagctggcgaagaagcagttcgcaagttcaagaaaggtgat
gaactggaagcgattgttttggcgatcgacgttgaacgtgaacgcgtttctctcggcgta
aaacaattggaaggtgacccattcaataactactgcgcaatgaacgacaaaggcgcgaca
gtcactggtacagtgaaatctgttgaagctaaaggcgcagtgatccaattggcagacgaa
gttgaaggctacttgcgtgcatctgaaatctcccgcgatcgcgtggaagatgctggtaca
cacttgaaagttggtgacagcgttgaagcattggtattgaacatcgaccgcaaagcacgc
agcatccaattgtctatcaaggcaaaagactctgcagaaacacaagaagcaatgcaaaag
atgtctgctgactccagcgcagcttctggcacaacaagcctcggtgctttgttgaaagct
aagctcgacaataagaactaa
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