Undibacterium cyanobacteriorum: RF679_12460
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Entry
RF679_12460 CDS
T10254
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
ucy Undibacterium cyanobacteriorum
Pathway
ucy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RF679_12460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ucy02000
]
RF679_12460
02044 Secretion system [BR:
ucy02044
]
RF679_12460
Transporters [BR:
ucy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
RF679_12460
Secretion system [BR:
ucy02044
]
Type I secretion system
Adhesin protein transporter
RF679_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_21
AAA_29
Zeta_toxin
ABC_ATPase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WMW79459
LinkDB
All DBs
Position
complement(2971896..2974103)
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AA seq
735 aa
AA seq
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MSQNDTPATSGSPLRFQMGAPSVGIREDLLHRDPLLDCLVELTRIHGRPSTRAALTAGLP
LLPEGLTPSLFARAAAHAGFSAKVVKRDLRKIDLALLPVILLLQNNEACLLQAWNEDGTQ
AQVLLPDSGQGAVTMSLEELNARYIGVAIFSRPHFRFDQRTPPLVQVPQKHWFWGAVLEQ
KSIFKDILAAALLINIFAIAMPLYTMNVYDRVVPNFAVETLWVFSGGIVLVLILDYIIRL
MRGHFISLVSSRIDLKLSALIMERVLGMRMSERPASVGAFASNLRSFETVRDFIASATVT
AMIDLPFAILFLLTLIWIAWPLVLLPIIGIILVVIYSYSVQHKMRELSETTFRAAALRNS
TLVESLTALETIKAHGAESQMQAKWEKTTAFLAKVNSELKLLSSSSINGASTIQQLVNVA
VVIAGVYLIQERMMSMGGLIAATMLAGRAMTPVAQVVGLMLQFEGAKNSLASLEKIMATP
TERSDETAFVHRPEIKGQIEFKNVHFSYPGRKEEALRGVSFNIMPGEKVVIIGRIGSGKS
TLHKLILGLYAPTKGAVMLDGVDLRQLDPADLRRNLGYVEQDSMLFYGTLRENITIRAPY
ADDRAVLAAAELAGLQEFVNSHPEGFDMVIRERGESISGGQRQSIAIARAALLDPPVLLL
DEPTSAMDYPSEAQFKDRIAKYGQHKTMLIVTHRPSLMDLATRVIVIDSGVVVADGPRDK
VMHALQTGQIGKARV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaacgacacacctgcaacatcaggatcaccgcttcgcttccaaatgggagcg
ccttcggttggcattcgagaagatttacttcatcgagatcccttgcttgattgtttagtt
gaattgactcgtattcatggccgaccaagcacgcgcgcggccttgacagccggattgcct
ctgttgccggaaggactcacgccatcgctattcgcgagagcggcagcacatgcgggtttt
tccgccaaagtggtgaaacgcgatttacgtaagatcgatttagctttattgcctgtcatt
cttttgctgcagaataatgaagcttgcctcctccaagcgtggaacgaagatggtactcaa
gcgcaagtgttgttgcctgattcagggcagggtgcagtcaccatgtctttggaagaattg
aacgctcgctatatcggcgtagcgatcttttcacgtccgcactttcgttttgatcaaaga
acacctccgttggtgcaggtccctcaaaagcactggttttggggcgcagtacttgagcaa
aaatcgatcttcaaagatatcttagctgcagcgttgttgattaatatttttgccatcgca
atgcctctatatacgatgaatgtgtacgaccgcgttgtccccaactttgcggtcgagact
ttgtgggtgttttctggcgggattgtgttagtcctgattttggattacatcattcgcttg
atgcgaggtcacttcatcagtcttgtcagtagtcgtattgacctcaaactctcagctctc
attatggagcgagtgttgggtatgaggatgtctgaacgaccagcttcggttggcgctttt
gcctcgaatttacgctctttcgagactgttcgtgatttcatcgcctcggccacggtgacg
gcgatgattgatttaccgtttgcgattctgtttttgttgaccttgatttggattgcatgg
cccttggtcttgttgccaattattggcattattttggtcgtcatttatagctactctgtg
cagcacaaaatgcgcgaactttcggagaccacattccgtgcagctgctttgcgcaactca
accttggtggaaagcctcaccgccttggaaacgatcaaggcgcacggtgctgagagtcaa
atgcaggccaaatgggaaaagacgactgcgttcttggctaaggtgaattctgaactaaag
ctactttcttcctccagtatcaatggtgcttcgacaattcagcagttagtgaatgtcgcg
gtcgttattgccggcgtttatctcattcaagaacggatgatgtcgatgggtggtttgatt
gcagcaaccatgttggcaggacgtgctatgacccccgttgctcaggtagtcggactgatg
ttgcagtttgagggagcaaagaactcattagcgtcgctcgaaaaaatcatggcaacacca
acagaacgcagtgatgaaacagcctttgtacatcgtccagagatcaagggacaaatcgaa
tttaagaatgtccactttagttatccaggcagaaaagaagaggccttgcgaggtgtaagc
ttcaatatcatgccgggcgaaaaagtcgtcattattggccgtattggatctggtaaatcg
acgctgcacaaattgattttggggctgtatgcgccaaccaaaggtgcagtaatgctcgac
ggagtcgatttgcgacagcttgatcctgcggatttacgtcgaaatttgggttatgttgaa
caagattcgatgctcttttatggcacgctgcgcgagaatattacgattcgtgcgccgtac
gccgatgatcgcgcagtgctggcagcggcagagcttgccggtttgcaggagtttgtgaat
agtcatcctgagggttttgatatggtcattcgcgagcgtggcgagtcgatctcaggaggc
caacgtcaaagtattgcgattgcgcgagccgcgttacttgatccgccggttttgttattg
gacgaaccaaccagtgccatggattatccatcggaggcgcagttcaaagataggattgct
aagtatggacagcacaaaaccatgctgatcgtgactcatcgaccaagtctgatggatttg
gcgacacgggttattgtgatcgatagtggcgtagtagtcgccgatggtccacgcgataag
gtgatgcacgcattgcagaccggtcaaattggaaaggctcgagtatga
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