Undibacterium cyanobacteriorum: RF679_12485
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Entry
RF679_12485 CDS
T10254
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ucy Undibacterium cyanobacteriorum
Brite
Enzymes [BR:
ucy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RF679_12485
Transfer RNA biogenesis [BR:
ucy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RF679_12485
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NCBI-ProteinID:
WMW79463
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Position
complement(2977929..2979992)
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AA seq
687 aa
AA seq
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MNVFFEESGDFKAGSVLSQAGEAYQVELASGKRTKVKSKDVLLQFTSPEPGALLANAKSI
VEGIDLGFLWEVAGTDEFGFADLGAEYFGANPKTEELAGLILALHQSPIYFQKKGRGRYK
AAPEENLKAALAGIEKKKQQALVQAAYVEELKQYRLPDAFASIGLQLLFKPDKNSISYKA
MVEACAELQTTPAKLMLACGGLKNAKDFHLSKFLLEHFPKGVGFPATPLPSLPENLSVAA
VQAFSIDDVTTTEIDDAFSVQHLDANTVRVGIHIAAPGLGIQRNDAFDQMARQRMSTVYM
PGDKITMLPDDLVQVYTLGEGQTRPAVSLYVDLSTQDWQIQRTETKVEMVPMAANLRHND
LDALVTEENLANDAGEYPHKAEIALLWKWAQVLEAGRMAKRESFGLKPEQNNRVDFNFYV
EDDVVSIVRRKRGAPLDKIVAELMILANSTWGKLLADHGIPGIYRAQGGGSGGWAAKMQV
RMVTHAAPHQGLGVDQYAWSTSPLRRYTDLINQWQIIACVQHGVTAALVAPFKPKDADLF
AIVSGFDAAYAAYADFQTNMERYWCLRWLGQEQKRQVDAVVLKDEVLRLVEIPLIIRMAG
MPAAARGAQVRLEILRWDELDLSVEARFLEVLGTETSEDLGDEAEDEMELVEDFSASETE
NVELTQATETEMTVAEEVKPDDEVQQA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtattttttgaagagtctggtgatttcaaagcaggtagcgtgttgtcacaggca
ggtgaggcatatcaagttgagttggctagcggtaagcggactaaggtcaaaagtaaggat
gtgctattgcaatttacgagtccagaaccaggcgccttattagccaacgcaaagagtatc
gtcgaaggaatcgacctcggttttctgtgggaagtggctggcaccgatgagtttggcttt
gcagatttgggtgcagagtatttcggcgcgaatcctaaaaccgaagaattggccggcttg
attttggcactacaccagtcgccgatttacttccagaaaaaagggcggggtcgttataaa
gctgcaccggaagagaatctcaaagcggccttggctgggattgaaaagaagaaacagcaa
gccctggtgcaagcggcgtatgtggaagaacttaagcagtaccgtttgccagatgccttc
gctagcattggcttgcaactcttatttaagcccgacaaaaatagtatctcgtacaaggcg
atggtggaagcctgtgccgaattgcagaccacgcctgctaaattgatgctggcatgcggt
ggtttgaaaaacgccaaagattttcacttgtcgaaatttttgttggaacatttcccaaaa
ggcgtgggatttcccgcgacaccgctgccgagcttacccgagaatttatcggtagctgcg
gtacaagctttttctatcgatgacgtgacgaccaccgagatcgatgacgctttttctgtg
caacaccttgatgcaaatacggtcagagttgggatccatattgctgcaccaggtcttggt
atccaaagaaatgacgcctttgatcagatggcgcgtcaaagaatgtcaaccgtctatatg
ccgggcgacaagatcaccatgttgccggatgatctggtacaggtctacaccttaggcgaa
ggacaaacgcgccccgccgtttctttgtacgtcgatttgagcacccaagattggcagatt
cagcgcaccgaaaccaaagtcgaaatggtgcccatggcggcgaatttgcgacataacgat
ttggacgctttggtcacagaagaaaacttggcaaatgatgcgggtgagtatccgcacaaa
gctgagatcgctttgttgtggaagtgggcgcaagtgttggaagcgggacggatggcgaag
cgcgaaagttttggtctcaagcccgagcaaaacaatcgggtcgattttaacttctatgtg
gaagacgatgtggtcagtatcgttcgccgtaagcgcggcgcaccgctcgataaaatcgtc
gcggaattaatgatcttggccaatagcacctggggaaaactcttggccgatcacggtatt
ccagggatctatcgggcgcaaggtggcggcagtggtggctgggcggcgaagatgcaagtg
cgcatggtgacgcacgcagcgccgcatcaaggtttgggcgtcgatcaatatgcttggagc
acctcgccattgcgacgctatacggatttgattaatcaatggcaaatcatcgcttgcgtg
caacacggtgtcaccgcagccttggtcgcaccattcaaacccaaagacgctgacttgttc
gcgattgtctctggtttcgatgctgcctatgctgcctatgctgacttccaaactaatatg
gaacgttattggtgcttgcgttggttgggacaagaacaaaaacgtcaggtcgatgctgtt
gttttgaaagacgaagtcttgcgtttagttgaaattcctctgatcattcgcatggctggt
atgccagcggccgcgcgaggtgcgcaagtgcgcttggaaattttgcgctgggatgagttg
gatttgagtgtcgaggcacgtttcttggaagttttgggtaccgaaacctctgaagatctc
ggggatgaggcagaagatgaaatggaactagtcgaggatttctcggcgagtgaaacagag
aatgtcgaacttactcaggcaacggaaacagaaatgacagtggctgaggaagtaaaaccg
gatgatgaagttcaacaggcataa
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