Undibacterium cyanobacteriorum: RF679_13775
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Entry
RF679_13775 CDS
T10254
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ucy Undibacterium cyanobacteriorum
Brite
KEGG Orthology (KO) [BR:
ucy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ucy03036
]
RF679_13775 (xerD)
Chromosome and associated proteins [BR:
ucy03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RF679_13775 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
Phage_int_SAM_4
DUF4160
Phage_int_SAM_5
Vmethyltransf_C
Motif
Other DBs
NCBI-ProteinID:
WMW79715
LinkDB
All DBs
Position
complement(3275189..3276217)
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AA seq
342 aa
AA seq
DB search
MVSKAPPKAKLSAAKKTNATSVAAEASNAPIKRRGRPPTTAPIELPAHVHGQIDEFCDNL
WLEDGLAKNSLEAYRRDLRLFAEWLQQHGGKDLLQVNEADIFSYVAAKHSVSKATSANRR
MTVLKRYYQQAFRQNRISVNPCTKLRSAKQPSRLPKTLSEKQVEALLQAPDDNTPLGLRD
RTMLELLYACGLRVSELVSLKSFEVSLNDGVLRVTGKGSKTRLVPFGEVARLWLQRYLAE
GRPAILNGQIDDALFVTARGGAMTRQMFWVVIKKCAQQAGITAPLSPHTLRHAFATHLLN
HGADLRVVQLLLGHADISTTQIYTHVARERLKQLHALHHPRG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcaaagccccacccaaagcaaaactctccgcggcaaaaaaaaccaacgccact
agcgtcgctgcggaggcgtcaaacgcgcccatcaagcggcgtggtcgaccacccacaaca
gcaccgattgaattgcctgctcatgtgcacggacaaatcgacgagttctgtgacaatctg
tggttagaagacgggctcgccaaaaattccctcgaagcctaccgacgcgacttacgctta
ttcgcagaatggttgcaacaacatggcggcaaagatttattgcaagtgaacgaggccgat
attttttcttatgtggcggcaaagcatagcgtttccaaagccacctcggcgaaccgccgc
atgacagtgctgaagcgctattaccaacaagcgtttcggcaaaatcgtatcagcgtcaat
ccgtgcaccaaactacgctcggccaagcagccttcgcgcttaccgaaaaccctcagcgag
aaacaagtcgaagccttgctacaagcgcccgatgacaacacgcctctgggtttgcgggat
cgcaccatgcttgaacttttatacgcttgcggcttgcgcgtcagcgaactggtgtcgctt
aaatcatttgaagtgagtttgaatgatggcgtcttgcgcgtgacaggcaagggcagcaaa
acgcgcctagtaccgttcggcgaagtcgcccgactctggttgcaacgctatctcgccgaa
ggccgcccagccatcctcaacggccaaatcgacgacgctttattcgtcaccgccagaggc
ggcgccatgacgcggcaaatgttctgggtcgtcatcaaaaaatgcgcccaacaagccggc
atcaccgcaccgctatcaccacataccttgcgccacgccttcgccacgcacttactcaac
cacggtgcagacttgcgcgtggttcagctattattaggccacgcggatatttccaccacg
cagatttatacgcatgtggcgagagagaggttgaagcagctgcatgctttgcatcatcct
agggggtga
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