Candidatus Uzinura diaspidicola: ASNER_011
Help
Entry
ASNER_011 CDS
T02439
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
udi
Candidatus Uzinura diaspidicola
Pathway
udi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
udi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASNER_011 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udi03021
]
ASNER_011 (rho)
03019 Messenger RNA biogenesis [BR:
udi03019
]
ASNER_011 (rho)
Transcription machinery [BR:
udi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ASNER_011 (rho)
Messenger RNA biogenesis [BR:
udi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ASNER_011 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
ATPase_2
AAA
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AGC66803
UniProt:
L7VML3
LinkDB
All DBs
Position
complement(11390..12541)
Genome browser
AA seq
383 aa
AA seq
DB search
MLLKTNNTKNKEFESIVKSEGVLEIMYENYGFLRSSDFNYLSSPNDIYVSQSQIILFNLK
TGDTIRGDIRPPKDGEKYFTLIKITEINGRAPYLLKNRIFFENLTPLFPEEKFKLAAKNS
SISTRIIDLFSPIGKGQRGMIVSPPKVGKTILLKEIANAIEANHPEVYLIILLIDERPEE
VTDMRRNVNGEVVASTFDEAAEKHVKVANMILQKAKRMVEFGHDVVILLDSITRLARAYN
TIAPSSGKILSGGIDAKALQKPKRFFGSARNIESGGSLSVIATAIIDTGSKMDEVIFEEF
KGTGNMELQLDRKIANKRLYPAINLVSSSTRRDDLLQDSTTLQRMWVLRKHLSEMNLVDA
MYLLKNQITRTKNNKEFLASMNR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttacttaagacaaataacacaaaaaacaaagaatttgaaagtattgttaaaagcgaa
ggtgttttagaaataatgtatgaaaattatggttttttaagatcttcagatttcaattat
ttatcgtctcctaatgatatttatgtctcacaatcacaaattatactattcaatttaaaa
acaggagatactatacgaggagatataaggcctccaaaagatggagaaaaatattttaca
ctcattaaaataacagaaattaatggaagagcaccatatttacttaaaaatcgtattttc
tttgaaaatcttaccccgttatttcctgaggaaaaatttaaactagctgcaaaaaattct
tctatttctacacgtattattgatcttttttctccaattggaaaaggacagagaggaatg
attgtatctccaccaaaagtaggaaaaacgatattattgaaagaaatagcaaatgctata
gaagcaaaccaccctgaagtctatttaatcatattacttatcgacgaaagacctgaagaa
gtgactgatatgcgaagaaatgtaaacggggaggtagtagcttcaacttttgatgaggct
gctgaaaaacatgtaaaagtagctaatatgattctacaaaaagctaaacgaatggtggaa
tttggtcatgatgttgtcattttgctagattctatcacacgacttgctcgtgcttataat
acaattgcaccatcttcaggtaagattttatctggaggaatagatgctaaagcattgcaa
aagccaaaacgtttttttggttcagcaagaaatattgagagtggaggatctctttctgta
atagctaccgctataatagatacgggatctaaaatggatgaagtaatttttgaggaattt
aaaggtacgggcaatatggaactgcaactagatagaaaaattgctaacaaaagactctat
ccagcgataaatttagtgtcatctagtacaagaagagatgacttattacaggattctacc
acattacaaagaatgtgggtattgcgaaaacatttatcggagatgaatttggtagatgca
atgtatttactaaaaaatcaaattactagaactaaaaataataaagaatttttagcttca
atgaataggtaa
DBGET
integrated database retrieval system
