Candidatus Uzinura diaspidicola: ASNER_117
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Entry
ASNER_117 CDS
T02439
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
udi
Candidatus Uzinura diaspidicola
Pathway
udi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
udi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASNER_117 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udi03019
]
ASNER_117 (pnp)
03016 Transfer RNA biogenesis [BR:
udi03016
]
ASNER_117 (pnp)
Enzymes [BR:
udi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ASNER_117 (pnp)
Messenger RNA biogenesis [BR:
udi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ASNER_117 (pnp)
Transfer RNA biogenesis [BR:
udi03016
]
Prokaryotic type
tRNA degradation factors
ASNER_117 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
KH_2
PNPase
KH_PNO1_2nd
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
AGC66882
UniProt:
L7VJJ7
LinkDB
All DBs
Position
113119..115086
Genome browser
AA seq
655 aa
AA seq
DB search
MIENPILDNIHLSDGRNISIDTGLLAKQSNGSVVVSMGNTMLLASVVAEKEGKEDVDILP
LIVDYRQNYSAVGKIPGGFIKREGRAFEEEILTMRIVDRVLRPLFPTNLFADIQIMVSLL
SYDDEILPNVLAALAASASLAISDIPFYGPISEVRLVRITGGRFIINPSLHDVLNSDIDL
VIGGSKESIIMMEGEMKEVSEEEILEAILFAHKAIKNQIEAQVHLAKRVKRSRIKRFYEK
EILEPKKFMHHYYLQLKRESIRDLIIRENHRIDGRTSKEIRSLFSTVDCIPSAHGSALFM
RGETQSLSYVTLGSSNDVNRIDNAIKEENEKFYLHYNFPPFSTGDIRLLRGVSRREVGHG
NLAQSALKNIIPENTPYTIRIVSEILESNGSSSMATVCAGTLALMDAGISIKRPASGLAM
GLIMDKGKEIILSDILGDEDYIGDMDLKVAGTKKGITACQMDIKIDGISYKILKKVFKQA
YQGRIFILQEMLKTLSMPRVPMKPNIPKIFNLKITKGSIGFVIGPGGKTIQEIQKKTNTI
ITIKEKGEFGIVEIFGKEENKINKATDCIKNITFLPELGGVYDAKVKYLKEFGAIVEILP
GKEYLLHISEINWEHEKNVEDVLKIGDIIRVKFMGIDSISRKIIISRKVLLPSLE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaatcctattttagataatatacatctttcagacggaagaaacatatcgata
gatactgggttacttgctaaacagtctaatggatcagttgtagttagtatggggaatacg
atgcttttggcttctgtagtagcagaaaaagagggaaaagaagatgttgatatcttgcct
ctcatcgtagattataggcagaattattctgccgtaggaaaaattccaggaggatttata
aagagagaaggaagagcttttgaggaagaaatattaacaatgcgcattgttgatcgtgtc
ttgcgtcctttatttccaacaaatttatttgcagatattcaaataatggtttctttacta
tcgtatgatgatgaaatattgcctaatgtactagcagctttagctgcttctgcatcttta
gcgatttcagatattccgttttatggtcctatttctgaggttcgtttagttagaataact
ggaggaagatttattatcaatcctagtttacatgatgttttaaactctgatattgatttg
gtaataggaggttctaaagagtctattattatgatggaaggagaaatgaaagaggtatca
gaagaagaaatattagaggctattttatttgctcataaagcaataaaaaatcagatagaa
gctcaagtacacttagcaaaaagagtaaaaagatctagaattaaaagattttatgagaaa
gaaatattagagccaaagaaatttatgcatcattattatcttcaattgaagagagaatca
attcgtgatttaataattagagaaaatcatcgcattgatggacgaacttcaaaagaaata
cgatctttatttagtactgttgattgtattccaagtgcacatggttctgctttatttatg
cgaggagaaactcaatctctttcttatgtgactttgggatcatctaatgatgttaatcgt
atagataatgccattaaagaagaaaatgaaaagttttatttacactataattttcctccg
ttttcaacaggagatattagacttttaagaggagtatctagacgagaagtaggacatgga
aatcttgcacagtcagcattaaaaaatattatacctgaaaatacaccctatacaatacgt
atagtctctgagattttagaatctaacggatcttcatctatggctactgtttgtgcggga
acactagctttgatggatgctggaatttctattaaaagacctgcatctggtctagcaatg
ggtttgattatggacaaaggtaaagagattattctttcagatattcttggtgatgaagat
tatattggtgatatggatttgaaggtagcaggaacaaaaaaaggaattacagcatgtcaa
atggacattaaaattgatggtatatcttataagattttgaaaaaagtatttaaacaagca
tatcaaggacgtatatttatattacaagaaatgttaaaaacactctctatgccaagagtg
cctatgaagccaaatattcctaaaatattcaatttaaagatcactaagggatctattggt
tttgtaataggacctggagggaaaactattcaagaaattcaaaaaaaaacaaatacaatt
attactataaaagaaaaaggagaatttgggatagtagaaatttttgggaaagaagagaat
aaaattaataaagctactgattgcattaaaaacattacatttctgccagaattaggaggt
gtttatgatgcaaaagtaaaatatcttaaagagtttggagctatcgtagaaattttacct
gggaaagaatatcttttacatatttcagaaataaactgggagcatgagaaaaatgttgaa
gatgtattaaaaataggggatattattagggtaaaatttatgggaatagatagcataagt
agaaaaattataatttctagaaaggttcttttacctagtcttgagtga
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