Candidatus Uzinura diaspidicola: ASNER_229
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Entry
ASNER_229 CDS
T02439
Symbol
dnaE
Name
(GenBank) bifunctional DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
udi
Candidatus Uzinura diaspidicola
Pathway
udi03030
DNA replication
udi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
udi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASNER_229 (dnaE)
03430 Mismatch repair
ASNER_229 (dnaE)
03440 Homologous recombination
ASNER_229 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
udi03032
]
ASNER_229 (dnaE)
03400 DNA repair and recombination proteins [BR:
udi03400
]
ASNER_229 (dnaE)
Enzymes [BR:
udi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASNER_229 (dnaE)
DNA replication proteins [BR:
udi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASNER_229 (dnaE)
DNA repair and recombination proteins [BR:
udi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASNER_229 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
SLBP_RNA_bind
Motif
Other DBs
NCBI-ProteinID:
AGC66983
UniProt:
L7VN51
LinkDB
All DBs
Position
213271..216699
Genome browser
AA seq
1142 aa
AA seq
DB search
MSAVGITDYGNMMGAFSFLNTIETYNQNILNTCNKLKGVIGCELFVSVDSSKKPLTKNQQ
DQRWKQVFLAKNKNGYHNLVKLCSEGYINGYSSGFPRVEKELILQYQKDLIALTGDLSAE
IPYTILNYGKRRAEEVFKWWHEKFSGDFYVELLRHGLKEQNYVNKVLLQFSQKYGVKYIP
QNNTFYLEKKDANAHDILLCVRDGEKQSAQIGIGRGYRFGFSRQEYYFKTQDQMMTSFSD
VPESFDYLDELMEKISIFSLSREILLPKFSIPKEFQSSGSLEDGGKRGENSYLYHLAFQG
AYQHYGAISPSIKERLVFELSTIEKTRFPGYFLIVQNFVSEARRMGVSVGPGRGSVAGSL
VAYCVGITQIDPIQYNLLFERFLNTDRVSLPDIDLDLDDRGRESIVKWVVNKYGNKQVAK
IITYGMMAAKSSIRDTARVLDLSLENADSIAKMMPEGVSLKNLLSMNVTQLRKKFYGHDL
ENGVKLLLIAKDNLLEGKVLRQACILEGLLRCIGVHACGVIITPSDITNYIPIAISKDSD
LLLTQFDNNVVESAGLLKIDLLGLKTLTIINDTVELVEKRHGLIIHEYPLDDLKTYQVFQ
KGETIAIFQYESIGMQRYLRKLKPDSFEDLIAMNALYRPGPIQYIPNFIARKHGKEPIVY
VLPEMKEFLSSTYGITVYQEQVMLLAQKLAGFTKGQADILRKAMGKKQKHILDKIKSKFI
YGAVRKGFPKNILEKIWKDWETFASYAFNKSHSTCYAYLAFQTAYLKTHYTYEFMAAVLS
NHIHNIKDISFFMAECRRLGLSVIGPDINESQQLFLVNEKGNIRFGFKAIKGIGEAVVDS
IIRERSKNGPYKSVLDLIKRIDSHIINKKSIESLVLSGAFDRFEPIHRAQYFYKERGYNM
IEKIILKKKKKAPLFYDRDFFFPYCNPWLNIVKLEKEKQTVGIYISSHPLYDYRLEIYAI
HGISLEDFNRNEDLWIGKSSVFLYGMVLRSESKMSIKKGKKDGFFTLEDYKNIRDFYIFG
DAYMKFSHLLTANTFLAIKVFLDRYKNGVIRINFLQILHLGEVFNLLNKELHIEIEVYKL
DHKMIDYIENTISKYKGNGTLKIFLLDRKENICMPSRKYDVHLDKRLFMELEKIQGLNLQ
LK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagtaggtattaccgactatggtaatatgatgggagctttttcttttctaaat
accatagaaacttataaccagaatattttaaatacgtgtaataagctaaagggagtcatt
ggttgtgagttatttgtttcagtggattcgtcaaaaaaacctttaactaaaaatcaacaa
gatcaacgttggaaacaggtgtttcttgcaaaaaataaaaatggttatcataatttagtt
aaattatgttctgaaggctatattaatggatattcttctggttttccaagagtagaaaaa
gaactaatattacaatatcaaaaggatttgattgctcttaccggtgatttaagtgcagaa
attccttatacaatacttaattatggaaaaagaagagccgaggaagtttttaagtggtgg
catgagaaattctcaggtgatttttacgtagaacttttgagacatgggcttaaagagcag
aattatgtaaataaagtgttattacaattttctcaaaagtatggagtaaaatacattcct
caaaacaatactttttatctagagaagaaagatgcaaacgcccacgatattttactttgt
gttcgtgatggagaaaagcaatctgctcaaattggaataggcagaggttatcgttttggg
tttagtaggcaagaatattattttaaaacgcaagaccaaatgatgacgtctttttctgat
gttcccgagtcttttgattatttagatgaacttatggaaaaaatcagtattttttctcta
agcagagaaatcttattgcctaaattttctattccaaaagaattccaatcttctggatct
ctagaagatggaggaaaacgtggggaaaattcttatttatatcatctggcttttcaagga
gcttatcaacattatggagcaatttctccctctattaaagaacgtttggtttttgagtta
tctacgatagaaaaaactaggtttcctggttattttcttatagtacaaaattttgtttcg
gaagctagaaggatgggtgtatcggtagggcctggaagaggatcagtagcaggatcttta
gtagcctattgcgtaggaattacacagatagaccccattcaatacaatttgcttttcgag
cgatttttaaatacagatcgcgtttctttaccagatatcgatctggatttagatgataga
ggtcgtgaaagtatcgtaaaatgggtcgtcaataaatatggtaataaacaagtagctaaa
ataataacgtacggcatgatggctgctaaatcttcaataagagatacagcaagagtgtta
gatctttctttggagaatgctgatagtatagctaagatgatgccagagggggtttctctt
aaaaatcttctttctatgaacgtaactcaactaaggaaaaaattttatggacatgactta
gaaaatggagtaaaattgctactaattgctaaggacaacttacttgaaggcaaagtttta
cgacaagcatgcattcttgaaggattattgcgatgtataggagtgcatgcttgtggagta
attattactccttcagatattactaattatattcctatagcaatttcgaaagattcagat
ctattgcttactcaatttgacaacaatgtagtagaaagtgctggattgcttaaaatagac
ttattaggattaaaaacacttactattattaatgatacagtagaattggttgagaaaaga
catggactcattatacatgagtaccctctagatgatttaaaaacttatcaagtttttcaa
aaaggagaaactatagcaatttttcaatatgaatctattggtatgcaacgttatctacga
aagctaaagccagattcttttgaagaccttattgccatgaatgccctttatcgccccgga
cctatacaatatatacctaatttcattgcacgaaaacatggtaaagagcctattgtttat
gttcttccagagatgaaagaatttctaagtagtacatatggaataactgtctatcaagaa
caggtaatgttattagctcaaaaattggccggctttaccaaaggtcaagccgatattttg
cgaaaagcaatgggaaaaaaacaaaagcatatactagataaaattaaaagtaagtttatc
tatggagctgttagaaaagggtttccaaaaaatatattagaaaaaatatggaaagactgg
gaaacttttgcttcttatgcctttaataagtcgcattctacctgttatgcttacttagca
tttcaaaccgcatacttaaaaacgcattatacatatgaatttatggcagctgttttaagt
aatcatattcataacataaaggatataagtttttttatggcagaatgtagacgtttagga
ttgagtgtgatcggaccagatattaatgaaagccaacaattatttttagtaaatgaaaag
ggaaatatacgttttggatttaaagctatcaaaggaattggtgaagcagttgtagattct
attattagagaacgttcaaaaaatggtccttataaatctgttttagatttaattaaacgt
attgattcacatataataaataaaaaatcaatagagtctttagttttatcaggagctttc
gatagatttgaacctattcatcgtgcccaatacttttataaagaaagagggtacaatatg
attgaaaaaatcattttaaaaaagaaaaaaaaggctcctcttttttatgatagagatttc
ttttttccttattgtaacccctggttaaacatagttaaacttgaaaaggaaaaacaaaca
gtaggcatttacataagttctcatccgttgtatgactatagattagaaatatatgcgata
catggcatatctttagaagatttcaatagaaacgaagatttatggataggaaagagtagt
gtatttctttatggaatggttctaagatcagaaagtaaaatgtcaataaaaaaaggaaaa
aaagatgggttttttacattggaggactataaaaatataagagatttttacatctttgga
gatgcatatatgaagttttctcatctgcttactgctaatacttttttagctataaaggtt
tttttagatcgttataaaaatggagttattcgtattaactttttacaaatccttcattta
ggtgaagtattcaatctactaaataaagaacttcatatagaaatagaagtttataagcta
gatcataaaatgattgactacattgaaaatactatatcaaaatataaaggcaacggaaca
ttaaaaatatttttattagatagaaaagaaaatatatgtatgccatcaagaaaatacgat
gtacaccttgataagagattatttatggaactagaaaaaatacaaggattaaatcttcaa
ttaaagtaa
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