Uloborus diversus: 129216089
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Entry
129216089 CDS
T09235
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
udv
Uloborus diversus
Pathway
udv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129216089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129216089
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129216089
mRNA cycle factors
Common to processing body (P body) and stress granule
129216089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
zf-MYST
Motif
Other DBs
NCBI-GeneID:
129216089
NCBI-ProteinID:
XP_054706211
LinkDB
All DBs
Position
2:complement(152469607..152553100)
Genome browser
AA seq
1009 aa
AA seq
DB search
MKASPSQIFKEAETLKASLTGEGLSTSDTWQKRQELCHLFESLLLIDLDYALDKKVEQDL
WSFIFRNPISACQSKAREHKKSNYSYTNSQLSTLLETASGFYLQLLQKLCCAYDIDLPCH
PRDSVYGLTKEWISRYPVAHQPRKSSLLYICQHCLVHLGDIARYRGQSLQAENFYRHAVD
LVPSNGQPYNQLALLEAASGEKLSTVFFYVRSLSVQHPFPLAATNLQNLFSKMSSDSSPE
GKPRMTAFEYVTVFLQFHAVVHLGNDLKKTDQMISKLTTSLPALIIAEKFETWQLVQMVA
VCLFAIEHTWGSLDFDKNSTSLDETMLSPEELKASSLIEELLASMLHAFLLPVHASLEPK
ETASYYTLPAVKIVLDWLLQDTQLLQHEALSKNPQVWHGLCKLLNDLDITTKESYDIKKF
EDIPLPEDWDLQSFLPLKKSQRRLKFSLSAATPSDEESMWLRAVRLCKLGESLACAGKEG
LNFLSVNHNDGNRLFKAVHQTDTLSEEVLQQIQELTVNPSPSVSSSDSAVLVNGNASEIP
ATSLRSKPTHSEGNPQQEVRFKLDDVQQRKEKSESDREVQNEKSDRRNKDSQIGRERRTG
RQNVAMQAILQQRAAQISSNMLNRTQEKENNSPLHQDVRQNSRPVNHIDVRPSQENCIAA
QIVKEVNLNRPPAHISAEQYNQFQQQVHSMAGAPHCERNESWIQQYNIQQTGLATVNQVA
RDNNPVTSYIQNALPRVVQAPTAFNFQQPQPPQQQQSTQIINKQVTAGPTFIANPPNVLW
NYMGFVTPYQQTCATNPAQAGTQLIMQPNANQTPQQPTRQQTGFYVMNGAQQDLPHLETS
NLIHAYRSTAAGSTILSQQTPEMIRDQMQEHLATHPRIWPQDNGRAADIAANHIAMNQVV
SRAVPQTLQNSLSAQQLQAGGSSVPSHDMASNTYSLFNSPWPSGITMTRSNKEGGQHNGI
DPVFMQSRIQVCKIVLSFKVTILKNVINYFVFSLKKKKKRRGSKNIAKC
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcctcaccttcgcaaatatttaaagaagcagaaactttgaaagcttctttgaca
ggtgagggcctatccacctctgatacatggcagaaacgtcaagagctttgtcatcttttt
gagtcactgcttttgattgatttagattatgccttggacaagaaagttgaacaggatttg
tggagctttattttcagaaatccaatatcagcttgccagtcaaaggcccgtgaacataag
aaatcaaactacagttatactaatagtcagttatctactcttctggaaacagctagtgga
ttctatttgcaacttcttcaaaaactgtgttgcgcttatgatatcgatcttccttgtcat
ccaagagattctgtttatggactaactaaagaatggattagtagatatcctgttgctcac
caaccaagaaaatcttcgcttttgtacatttgtcagcactgccttgtacacttgggtgat
atagctcgttatagagggcaatctttacaagcagaaaatttttatcgtcatgcagtggac
ctggtaccaagtaatggtcaaccatacaatcaacttgcattattagaggcagctagtggt
gaaaagctttcaactgtatttttttatgtacgaagcttatctgtacagcatccgttccca
ttagctgcaacaaatcttcaaaatctcttctcaaaaatgtcatctgatagtagtccggaa
ggaaaacctcgaatgacagcctttgaatatgttactgtgtttctgcaattccatgctgtt
gtacatttgggtaatgatctcaagaaaacagatcaaatgattagcaaattaacaacatca
ctccctgccttaataattgctgaaaaatttgaaacttggcagttggttcaaatggttgca
gtatgtttgtttgcaattgagcatacctggggctctcttgatttcgataaaaattcaaca
agcttggatgaaactatgcttagtcccgaggagcttaaagcttcttctctcattgaagag
cttctggcaagtatgcttcatgcttttttgctaccagttcatgcttctttagaaccaaaa
gaaacagcaagctattatactctaccagcagtaaaaattgtattggattggctgttgcaa
gatacacaattacttcaacatgaagctttaagcaaaaatcctcaagtatggcatgggttg
tgcaaattattaaatgatctagatattactacaaaagaatcttatgatattaaaaaattt
gaggatattcctcttccagaagattgggacctacagtcatttcttcctctaaaaaagtcc
caaagacgcctgaaatttagtcttagtgcagctactccaagtgatgaagaatctatgtgg
cttcgtgcagtgagactgtgcaagcttggagaatccttggcctgtgctggaaaagaaggg
ttgaatttcttatcagttaatcacaatgatggaaaccgtctctttaaagctgtccaccaa
acagatacattatctgaagaagttttacaacagattcaagaacttactgtaaatcctagt
ccttcagtatcttccagtgattctgctgttttagtcaatggaaatgcttcagaaatccct
gccacatcactccgttcaaaacccacacattccgaaggtaaccctcagcaagaagtgcgc
tttaagctagatgacgtacaacaacgcaaagagaagtcggagtcagatagagaagtgcag
aacgaaaaatctgaccgtcgtaacaaagattcacagataggaagagaaagacggactggt
agacagaacgttgcaatgcaggctattcttcaacaacgagctgcacaaatttcttcaaat
atgctaaaccgaacgcaagaaaaagaaaacaactcaccactacaccaagatgtgaggcag
aattctcgtcctgttaaccacattgatgttcgaccatctcaggaaaactgcatagcagct
caaattgttaaagaagttaatctcaacagacctccagcacatatatcagctgagcagtat
aaccaatttcaacaacaagttcattcaatggctggagcaccccattgtgaaagaaatgaa
tcttggatccagcagtataatattcagcaaactggtcttgcaactgtaaatcaagttgca
cgtgataataaccctgtaacaagttacatccagaatgctttgccacgtgtggtacaggca
cctactgctttcaattttcaacaaccccagccaccacaacagcaacaatctacccaaatc
atcaacaaacaggtaactgctggtcccacatttatagcaaacccaccgaatgtgctgtgg
aattacatgggctttgtgacgccataccagcaaacgtgtgccaccaatcctgcccaagct
ggtacgcaactaataatgcaaccaaatgccaatcaaactccacaacagcctacacgccaa
caaacaggtttttatgtgatgaatggtgcacagcaagatttgcctcaccttgaaacttcc
aatctcatccatgcttacagaagtactgcagcaggctcaactattttgtctcagcagact
cccgaaatgatacgggaccaaatgcaagagcacctagccacacatcctcgaatttggcct
caagacaacggaagagctgctgatattgcagcaaatcacattgcaatgaaccaggttgtt
agtcgtgcagtccctcagactttgcaaaatagtttatctgcacaacaactgcaagctggt
ggatcatctgtaccatctcatgacatggcctctaacacatattcactcttcaattctcca
tggccttcaggcataaccatgacaagatcaaacaaagaaggaggtcagcataatggcatt
gatccagtctttatgcagtctagaatccaggtttgtaaaattgtattatcttttaaagtg
accatacttaaaaatgttataaattattttgtgttttctttaaaaaaaaaaaaaaaaaga
agaggatctaagaacattgctaaatgttga
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