Uloborus diversus: 129217039
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Entry
129217039 CDS
T09235
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
udv
Uloborus diversus
Pathway
udv03018
RNA degradation
udv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129217039
09123 Folding, sorting and degradation
03018 RNA degradation
129217039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129217039
03041 Spliceosome [BR:
udv03041
]
129217039
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129217039
mRNA degradation factors
5'-3' decay
Lsm complex
129217039
Spliceosome [BR:
udv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129217039
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
DHQ_synthase
Motif
Other DBs
NCBI-GeneID:
129217039
NCBI-ProteinID:
XP_054707250
LinkDB
All DBs
Position
2:complement(53168522..53169058)
Genome browser
AA seq
91 aa
AA seq
DB search
MAATSVTNPSTLLPLELIDKCIGSKIHIIMKNDKEIVGTLLGFDDFVNMVLEDVTEYEST
PEGRRITKLDQILLNGNNITMMVPGGEMPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaccagcgtcaccaatccatcaacattgttgccgctagaactgattgacaag
tgtattggatccaaaatacatataatcatgaaaaatgacaaagagatcgttggaacactt
ttggggtttgatgattttgtcaacatggtcttggaagatgttactgagtatgaaagtact
ccggaaggtcgcaggataacaaaattggaccaaatattattgaatggaaacaatatcacc
atgatggtacctggtggtgaaatgcctgaagtctga
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