Uloborus diversus: 129217097
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Entry
129217097 CDS
T09235
Name
(RefSeq) protein PAT1 homolog 1-like
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
udv
Uloborus diversus
Pathway
udv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129217097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129217097
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129217097
mRNA degradation factors
5'-3' decay
Decapping complex
129217097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
GATA-N
Cyclase_polyket
Motif
Other DBs
NCBI-GeneID:
129217097
NCBI-ProteinID:
XP_054707320
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All DBs
Position
2:67173591..67246122
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AA seq
800 aa
AA seq
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MADNFFGFDTEFPTRMNVLGKLGLDEELLTDNVEEEYDALNDETFGHANDDDWETAHEKL
AVLIKSTNVEARSVFNDSLLEADESQNEIVSKSISQLGMEDDLDDPAIMTISKNYHSSSR
LATPFGPSPPPPAILESEICGSPKTHSIWSTTPKDSGIASFLKSISHSSDNFPYKDSPVP
LNSSFDNVFTSPPPKPRALRVEELEKDLLSSSSKPLQTSSKDWPHVPVPHLKTNHSDIPN
KSPSLHFPNVNNNLNKLSQEKMLTREEVEQRMLSDSRMRFPPKAAHPFVFGPNTMLPTKP
NNLPSPLPPHVLHVPPPIGPPLLGNNVPVPERIHPFQEELRRRYLENFMSQNCQPMSAHF
NPANAKMVQPLLRNMRGYNLPPHPLMHKQFQFPFPQNNKQYENHHPQFENEYSHNSLDVE
DEYAGLMTQKEKEWLIRIQIMLLKSDNPYVEDYYFTTQVARRCRKKFLESGLKGGGDAPE
LILPEMSKHDKTYVPTQFAGSLGKLQAVSVNFPRKVLDITVARSLEEEDSKTVPSLSLMR
RHRRLLFDIEKIYNHFLKIEDEERKILAKPDCKEAGHRSEILSLKEKVFTGFFNDSSSDE
NFQNILAIRKGRNLFMRALEVFSLEQQVHCLSALFRNLPAVLKRDQNDLVFVQHCSTVVD
VVNRCELGYLVKLSEALWKGNDASELHSSTKDKNSFVAVLKNKFGSSVICSLLTRSEALY
CFNENVESDLQSRWAKIVLHLADTLCELTNYTIAPPAVPCKNLVRHFQRFDITKEKIEKL
KEILLVFEIDMNNKENISNV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaatttttttggttttgataccgagttcccaactcggatgaatgtgcttgga
aagcttggattagatgaagaattgttaacggataatgttgaagaagaatatgatgccctt
aatgatgaaacatttggccatgccaatgatgatgattgggaaactgcccatgaaaagttg
gctgtgttaataaaaagcactaatgtggaagctcgatctgttttcaacgattctctttta
gaagctgatgaaagtcaaaatgaaattgtgtcaaaaagcatttcacagttgggaatggaa
gatgatttagatgatcctgccataatgacaatttcaaaaaattaccattcttcgtctcgc
ctagcaactccttttggaccatctcctcctcctcccgctatattagagagtgaaatttgt
ggatcacccaagacacactccatttggagcacaacccctaaagatagtggcattgcttcc
tttttgaagtctattagtcatagttctgataattttccttacaaggactcccctgttccg
ctcaactcttcttttgataacgttttcactagtccacccccaaaaccaagagcattaaga
gtagaagaacttgagaaagatcttttgtcttcatccagtaaaccattgcaaacttctagc
aaggattggccgcatgttccagttcctcatttgaagacaaatcattctgatatccctaac
aaatcaccatctctacattttcctaatgtaaataataacttgaataaattaagtcaagaa
aagatgctgacaagggaagaggttgaacaacgtatgctttctgattcaagaatgcgtttc
ccccctaaagctgcacatccttttgtatttggaccaaatactatgctacctactaagcca
aataatctgccttctcctcttccacctcatgtgctgcatgtcccgcctcctattggccct
cctctactaggtaataatgtccctgtgccagaacgaatacatccttttcaagaggaatta
agaagaagatatcttgaaaacttcatgtcacaaaattgtcaaccaatgtcagctcatttt
aatcctgccaatgccaaaatggtgcagcctttactacgtaatatgcgtggatataatcta
ccacctcatccgttaatgcataaacagtttcagttcccttttcctcaaaacaacaagcaa
tatgaaaatcaccacccccagtttgaaaatgaatattctcataattctctggatgtagaa
gatgaatatgctggtctgatgactcagaaagaaaaggaatggcttattcgaatacaaatt
atgttactgaagtctgataatccttatgtagaagattactatttcacaacacaagtagct
aggagatgcagaaaaaagtttttagaaagtggtttgaaaggtggtggagatgctcctgag
cttattcttccagaaatgtcaaaacatgacaagacttatgtgcccacacagtttgcagga
tctttgggtaaacttcaagcagttagtgtcaattttcccagaaaagttctagatatcact
gtagctcggtccttagaagaggaagatagcaaaactgttcccagtttatctctcatgcgc
cgccatcgcagactactttttgacattgaaaagatatataatcactttttgaagatagag
gatgaggaaagaaaaattcttgctaaaccagattgtaaagaagctggccatcggtccgaa
atactatcattgaaagaaaaagtcttcactggattctttaatgacagttcatctgatgaa
aattttcaaaatattttagcaattcgaaagggccgtaatctttttatgcgagctttagaa
gtgttcagtttggagcagcaagtgcattgtctctctgctttatttcgcaatttaccagca
gttctaaagcgagatcaaaatgatcttgtttttgttcaacactgcagtacggttgttgac
gttgtcaacaggtgtgagttagggtatttggttaaattaagtgaagccctttggaaaggt
aatgatgcatcagaattacattcatctacgaaagacaagaatagcttcgttgctgttttg
aaaaataaatttggatcatctgtgatatgcagcttactaacaagatctgaagctctatat
tgttttaatgaaaatgttgaatctgatttgcaatctagatgggcaaaaattgtgctacat
ctggctgataccttgtgtgagctgacaaactatactattgcccctccagcagtaccatgc
aaaaatttagtaagacatttccaaagatttgatatcactaaggaaaaaatagaaaagctc
aaagaaatattgcttgtgtttgaaatagatatgaataacaaagaaaatataagtaacgtt
tga
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