Uloborus diversus: 129218030
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Entry
129218030 CDS
T09235
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
udv
Uloborus diversus
Pathway
udv04512
ECM-receptor interaction
udv04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129218030
04518 Integrin signaling
129218030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
udv00536
]
129218030
Glycosaminoglycan binding proteins [BR:
udv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129218030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
129218030
NCBI-ProteinID:
XP_054708184
LinkDB
All DBs
Position
3:36645805..36752697
Genome browser
AA seq
1487 aa
AA seq
DB search
MELRLVVPVLFWTWCANVVLAQYYEEVDDIDDVTTCLFEGVRYVDQEEWKPDACTSCRCY
LGNTVCDTEECPDLLCRSQKYIPLGKCCPVCADDDAVFGPEETVSPRSSPDQVPAVGLPD
YSVVPVVGPPGYSGEPGSPGSPGGRGTPGSPGSPGTPGEPGPPGPPGNHGYSNWFHQFAL
TPGFSGDKGPAPDAFHFLQAQVGPVGPRGTPGSIGQPGVQGFQGVRGETGDTGAAGPPGL
PGPRGLPGLPGKDGESGEDGRPGPPGPPGPAGVKGPPGLPGLPGAKGHQGFPGLDGARGE
QGAQGEKGMLGAVGKMGTPGPMGPPGPRGERGREGPTGPPGLRGVDGLPGQPGPTGPIGR
SGPPGFPGSPGPKGESGALGPKGSQGTPGLRGEVGAAGVPGERGQVGPPGKDGIPGERGS
PGDRGANGIPGFPGTRGPPGLPGNQGVAGPKGTQGDRGEPGIRGESGRKGEIGTIGPRGL
PGVPGTGGKRGKAGPPGPVGPSGAPGERGPSGLRGLPGPEGAAGMKGIPGDRGMEGVPGP
KGMQGEAGRQGPQGIQGFMGPTGAAGNPGKDGTPGDRGLPGLDGKQGPPGPQGAQGVPGL
LGLPGIKGERGDRGSDGIPGLSGAQGRKGDSGKDGLPGLQGERGPTGETGAKGEAGPTGS
RGFGGIPGLPGPPGAPGKNGLAGTPGTPGPMGLKGERGERGFPGERGLIGLPGPIGLRGE
LGPPGKDGAPGPPGERGQKGSSGPSGLVGLPGRRGDFGPLGPKGERGDSGPQGAPGPQGR
PGEPGPIGLTGLPGPQGDHGEKGALGQVGPQGNPGPQGVQGDKGPQGPQGQQGFPGPVGL
TGLRGEKGIQGLVGSKGATGDTGLQGPPGQAGQQGARGPQGEKGPRGNEGKKGHAGFPGT
PGLPGNPGIAGKPGVPGPPGSPGTPGAKGPKGDSGRMGVPGPSGNPGIPGFPGSKGDVGS
EGRPGPQGPAGPMGPSGDKGPPGLPGIQGRQGAQGPKGPQGVRGSEGKPGADGNPGLQGL
TGAPGPIGRPGEPGPEGSVGKDGPQGAPGRTGDKGPSGPPGPLGQPGLPGLQGMPGPSGP
PGASGERGERGERGLAGQPGPQGPRGLAGPIGPVGDKGPKGDIGPTGEKGHRGLLGLQGL
PGAVGLPGDKGMIGNPGPPGMKGPPGPKGPQGNPGNPGPSGMLGIPGPRGLTGEHGRDGP
PGPVGPPGPPGPPGSGFQYDAASLAALMAQGQGGFKGFDPLLGDDSNNEYDNLDLSSKSP
AEAKELLIQLFTKLRKQVQLRKPDGSKQLPAKTCKELIEAQPNLPSGKYWIDPNGGEVND
AIEVFCNMETQETCILPEPEEIAKSRHVIGRGQKTWFSEMESGFTFQYKIDHVQLTFLQL
VSNSASQTITYHCRNSIAYYDNKHKFLKRAIKLMAYNDLELTAEGNKRFVYSSTFDGCKA
RSNTWSYTTFTYNTDNPQRLPVMDIAPRDVGLGNQEFGISIGKACFS
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcgtttggtagttccagttttgttttggacatggtgtgcgaatgtagttttg
gctcagtattatgaagaagttgatgatatcgatgacgtaacgacttgtctttttgaggga
gtccgatacgttgaccaagaagaatggaaaccagatgcttgtacttcttgcaggtgttac
ctagggaatacagtttgtgacacagaagaatgtccagatttgctatgtaggtctcaaaaa
tacattccactgggaaagtgctgcccagtatgtgcagatgatgatgcagtatttggaccc
gaagaaacagttagtccgagatcttcacctgatcaagtaccagccgtgggattaccagat
tattctgtcgttcctgtagttggcccacctggatacagcggtgagccaggttcaccaggt
tctccaggaggaaggggcactccaggtagtccaggttcacctggaactccaggtgaacca
ggaccaccgggaccaccaggtaaccatggatacagcaattggtttcatcaatttgctttg
accccaggatttagtggtgataaaggacctgctccagacgctttccattttctgcaagct
caagtgggtcctgttggaccgagaggtacacctggatctatcggtcaaccaggcgttcaa
ggttttcaaggagtccggggtgaaactggagatactggagcagctggacccccaggatta
ccgggacctagaggactgccaggtttacccggaaaagacggagagtcaggtgaagatggt
agacccggacctccaggaccaccaggaccagctggtgtcaaaggtcctcctggactgcca
ggacttccaggagccaagggtcatcagggttttccaggattagatggcgctagaggagag
caaggagcacaaggagaaaaggggatgctaggtgcagtgggaaaaatgggaactcctggg
ccaatgggccctccaggaccaagaggagaaagaggaagagaaggccctactggtccacca
ggtctgagaggagttgatgggcttccaggacaacccggccctacgggaccgattggacga
tcaggaccaccagggtttcctggatcaccaggaccaaaaggagaatctggagcattagga
cctaaaggcagccaaggaacaccaggacttagaggagaagttggagctgctggagtgcct
ggagagcgtggccaagtaggaccaccgggaaaagatggaatacccggagaaagaggaagt
cctggagacagaggagcgaatggaattccaggttttcctggtactcgtggtcccccagga
cttcccggtaatcaaggagtagctggaccaaaaggaactcaaggtgatcggggtgagcca
ggcattcgaggagaatcgggaagaaagggcgaaattggtaccataggaccaagaggtcta
cctggtgttcctggaactggaggaaaacggggaaaagctggaccgcctggacctgttggc
ccatctggagctcctggggaaagagggccatctggacttcgtggtttacctggtccagaa
ggagctgctggaatgaaaggaattcctggtgacagaggaatggaaggtgttcctggacca
aaaggaatgcagggtgaagctggacgtcaaggtcctcaaggtattcaaggcttcatgggt
ccaacaggtgctgctggtaatcctggaaaagacggtactcctggagataggggccttcct
gggctggatggaaaacaaggaccaccaggaccacaaggtgctcaaggtgtacctggactg
cttggactgcctggaattaagggagagagaggtgacagaggctctgacggaattcctggt
ctttctggcgcacaaggacgtaaaggagattccggaaaggatggcttaccaggattgcaa
ggagaaagaggtcccacaggtgaaactggagctaaaggagaagccggtccaacaggttca
agaggatttgggggaattcctggactacctggtcctcctggagctccgggaaaaaacggt
ctagctggcactccaggaaccccaggaccaatgggtcttaagggcgaaagaggagagaga
ggtttccctggtgaaagaggcttgattggacttcctggacctattgggctaagaggagaa
cttgggccacctggtaaagatggggctccgggcccacctggggagagaggacaaaaagga
tcatctggaccatccggtttagtcggtctgcctggaaggagaggagattttggtccactt
ggccctaaaggagaaagaggtgattcaggccctcaaggagctcctggacctcaaggtcga
ccaggagagccagggcctataggacttactggtttaccaggtcctcaaggtgatcatgga
gaaaagggtgcgctaggacaagtgggaccacaagggaatcccggacctcagggagttcaa
ggtgataaagggccccaaggtcctcaaggacaacaaggattccctgggcctgtgggctta
actggacttcgaggcgaaaaaggcattcaaggcttagttggatctaagggagcgacaggg
gatacaggattgcaaggtccaccagggcaagctggtcagcagggtgctagaggacctcaa
ggagagaaagggcctagagggaatgaaggaaaaaaaggtcatgccggctttccaggcaca
ccaggtctaccaggaaacccaggaatagcaggaaaaccaggtgttccaggccccccagga
tccccaggtactccaggtgccaagggaccaaaaggtgactctggacgtatgggcgtccca
ggaccatcaggcaatcctggtattccaggttttccaggctctaaaggtgatgttggatct
gaaggaagacctggaccgcaaggtccagctgggccaatgggaccatctggagataaaggt
cctcctgggttacctggtattcaaggacgacaaggagcacaggggcctaaaggacctcag
ggagtaagaggatctgaaggtaaacctggagcagatggaaatcctggactgcaaggactg
actggagcaccaggacctattggccgcccaggagagccaggaccagaaggatctgttggt
aaagatggacctcaaggagctcctggccgaactggtgataaaggacctagtggaccacca
ggaccacttggccaacctggtttaccagggcttcagggtatgcctggaccttcaggacct
ccgggtgcatcgggggagagaggagagcgaggagaaagaggcttggcagggcaacctggt
ccacaaggacctcgtggtttagcagggcctattggtcctgttggagataaaggacccaag
ggtgacattggacctacaggagaaaaaggacataggggtttacttggattacaaggcttg
cctggagctgtaggtcttccaggtgataaaggcatgattggaaatcctggaccaccagga
atgaaagggcctccaggaccaaaaggacctcagggaaacccagggaatccaggaccctct
ggcatgctgggcatacccggaccaagaggtttaacaggcgaacatggcagagatggtccg
cctggaccagttggaccacctggacctcccgggcctcctggttcagggtttcaatacgat
gcggcttcattagccgctctaatggctcaaggacaaggtggatttaagggatttgatcct
ctcttaggagatgattcaaataatgaatatgacaacttagatctgtcatcaaaatctcct
gcagaagccaaagaacttctcattcaactttttactaaacttcgcaagcaagttcaactt
agaaaaccagatggatcaaagcaacttccagcaaaaacatgcaaagaattaattgaggct
caaccaaatcttcccagtggaaaatattggattgatccaaacggcggtgaagtgaatgac
gctattgaagttttctgcaatatggaaactcaagagacatgtattttaccagaaccagaa
gagattgcaaaaagccgccatgttataggtcgtggacaaaaaacatggttcagtgaaatg
gagtctggattcacatttcaatataaaatagaccacgtgcaactgactttcctacaactt
gtcagtaactcagcttcacagaccatcacttatcattgccgaaattctatagcatattat
gacaacaaacacaaattcctgaaaagagctattaaattaatggcatataatgatctagag
ctcacagctgagggaaataagcgtttcgtctacagctctacattcgatggttgtaaggct
cgatcaaacacctggtcatacactacatttacttataatacagacaatcctcaaagactt
cctgttatggacattgctccaagagatgttggactgggaaatcaagaatttggcattagc
attggaaaagcatgcttctcataa
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integrated database retrieval system