Uloborus diversus: 129219776
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Entry
129219776 CDS
T09235
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
udv
Uloborus diversus
Pathway
udv03022
Basal transcription factors
udv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129219776
09124 Replication and repair
03420 Nucleotide excision repair
129219776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129219776
03036 Chromosome and associated proteins [BR:
udv03036
]
129219776
03400 DNA repair and recombination proteins [BR:
udv03400
]
129219776
Enzymes [BR:
udv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129219776
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129219776
Chromosome and associated proteins [BR:
udv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129219776
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129219776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SNF2-rel_dom
PspAA
Motif
Other DBs
NCBI-GeneID:
129219776
NCBI-ProteinID:
XP_054710049
LinkDB
All DBs
Position
4:5630734..5768704
Genome browser
AA seq
827 aa
AA seq
DB search
MKVNIDGLLVYFPYDFIYPEQYSYMLELKRSLDAKGHGLLEMPSGTGKTLSLLSLIVAYH
KAHPAEVTKLVYCSRTIPEIEKVLQELRRLLTYIEKETGQVNKIVGLCLSSRKNLCCHPQ
VSREKDGRIVDGKCFALTASHKRSMAAVDPNVDICAYFEAFDRNGKEFPLPAGVYDLDDL
KDYGKKNGWCPYFLARHAITQATIVVYSYHYLLDPKIADLVSKEISKSSVVVFDEAHNID
SVCIDSMSVDITKRTIERSHHGIQILEKTVNKIKETDAKKLKEEYQRMVQGLKDVGIARE
TDIVLSNPVLPDEILNEAIPGNIRSAEHFIAFLKRFLEYVKMRMRVQHVVQESPAAFLKD
ILQKVCIERKPLRFCAERLRSLVRTLEITELNDMSSLTSLCNFATLASTYMKGFTIIIEP
FDDRTPSVPNPILHFSCMDASVAIRPVFQRFQSVIITSGTLSPLDMYPKILDFRPVIMAS
FTMTLARPCLCPMIVSKGNDQVSMSSKFETRDDIAVIRNYGNLLVDMCGIVPDGIVGFFT
SYTYMEAVVAAWYEQGIIDNILKKKLLFLETQDSGETSLALLNYVKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRCVIMFGIPFVYTQSRILKSRLEYLRDQFQIRESDFLTFDALRHA
SQCVGRAIRGKTDYGIMIFADKPKICSSLPRIRDPDLVQELKRRGIELTDIGPETPPIDM
LIGADFLGGILTGRIEVLPSGITAVETKLGWSVLGPGKKSSINMVSLCMHHSEIHKIWDL
ESLGITDPTERKTTKELDEETVTFFQETIRKTGNRYEVALPWTSSLA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaatattgatggtctattggtgtattttccatatgatttcatctatccagag
caatattcctatatgcttgagttgaaacgaagtcttgatgctaagggccatggactttta
gagatgccttctggcactggaaaaacactctccctgctatctctgattgttgcttatcat
aaggcccatcctgccgaagtgaccaaattagtttattgctctcgaacaattccggaaatt
gaaaaggttcttcaggaactgcgccgtttacttacttacattgagaaagaaacaggccaa
gtcaataaaattgtaggcttatgtttgagttctcgaaaaaatctctgctgccatccacag
gtcagcagagaaaaggatggaagaatagttgatggcaaatgctttgctttaacagcttct
cataagcgcagtatggctgctgttgatccaaatgtagatatttgtgcctactttgaggct
tttgatagaaatggaaaagaatttcctctaccggctggcgtatatgatttggatgatttg
aaggattatgggaagaaaaacggatggtgcccatattttttggctcgacatgctatcacc
caagctaccattgttgtgtacagttaccactacttattagacccaaaaattgctgattta
gtttcaaaagaaatttctaaatcatcagttgtagtttttgacgaggcacataacatagac
agtgtttgtattgattctatgagtgtagatataacaaaaagaactattgagaggagtcat
catggcattcaaatactggaaaaaactgtaaataaaattaaagaaactgatgctaaaaaa
ttaaaagaagaatatcaaagaatggttcaagggctaaaagatgtaggcatcgccagagaa
accgatattgttttatccaatccagttcttccagatgaaatcctcaatgaggcaatacct
gggaacattagaagtgctgagcatttcattgcatttctgaagaggtttttggagtatgtt
aaaatgagaatgcgagtgcagcatgttgtacaagaaagtcctgctgcctttttgaaggat
attttgcagaaggtatgcattgaaaggaaacctttgaggttttgtgctgaaagacttcga
tcgttagtgagaacactggaaattaccgagttgaatgacatgtcttcactcacatcactc
tgcaattttgctactcttgcaagcacttacatgaaaggttttacaattattattgagcct
tttgatgaccgtacaccatctgtgccaaatccaattctgcattttagctgtatggatgca
tcagtggctattagacctgtgtttcaaagatttcaatctgttatcattacttcagggact
ctttctcccttggatatgtacccaaaaattttggattttaggcctgttataatggcttct
tttactatgacactagctagaccatgtctttgcccaatgatcgttagtaaaggaaatgat
caagtttctatgtcatcgaaatttgaaaccagagatgatatagctgtaatccgtaactat
ggtaatctacttgttgatatgtgtggtattgtaccagatggcattgttggctttttcaca
agttatacttacatggaagcggttgtagcagcttggtatgaacagggtatcatagataac
attttgaaaaagaaattgctatttttggaaactcaagattctggagaaacgagtctggct
ctcctaaattatgtgaaggcttgtgaaaatgggagaggtgcggttttactttctgttgcc
agagggaaagtatctgaaggagttgattttgatcatcatcttggaagatgtgtcatcatg
tttggaatacctttcgtttacactcaaagtcgaatattgaagtctcgtcttgagtacctg
agagatcaatttcaaattagagaaagtgattttcttacttttgatgccttgaggcatgct
tctcaatgtgttggacgggccatcagagggaaaactgactacggtatcatgatttttgcg
gacaaacccaagatatgttcttctttgcctcgcatacgtgacccagatttagtacaagaa
ttaaaacgtcgaggaattgaactaacagacataggtccagaaactcctcctattgacatg
ctcatcggtgctgactttctgggaggaatattaacaggaagaatagaagttctgccatct
ggtataacagccgtagaaacgaaactcggatggagtgttttaggtccaggaaagaagagc
agcataaatatggtatcgctatgtatgcatcactcagagatacacaaaatttgggacttg
gaatctttgggtataacagatcccactgagaggaaaacaactaaggagctagatgaagaa
acggtcacattttttcaagagacaattcggaaaactggaaacaggtatgaggtggctctt
ccatggacatcctcacttgcatga
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