Uloborus diversus: 129220860
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Entry
129220860 CDS
T09235
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06823
collagen type XVIII alpha
Organism
udv
Uloborus diversus
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
udv04147
]
129220860
00535 Proteoglycans [BR:
udv00535
]
129220860
00536 Glycosaminoglycan binding proteins [BR:
udv00536
]
129220860
Exosome [BR:
udv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129220860
Proteoglycans [BR:
udv00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
129220860
Glycosaminoglycan binding proteins [BR:
udv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129220860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
129220860
NCBI-ProteinID:
XP_054711266
LinkDB
All DBs
Position
4:complement(139108635..139285074)
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AA seq
1129 aa
AA seq
DB search
MGFLGFYLLVRDDDDFPPFSSEAPGKADQAAVLMSFAFAGPPPLITPPPPGPGYLGIERT
TVKGQKGRAGRHGKPGSKVRDDDDFPPFSSEAPGKADQENLMKKDLPDGQQVIGTYKDTL
IATAKNNFETMSLVSDEEADAMLFLYMQHAIEYSDHAKITVKTVDRDDIETAIFRVPKLQ
ELWVEYGSGKQYLRYLSIHVLHPAVLMSFAFAGPPPLITPPPPGPGYLGIERTTVKGQKG
RAGRHGKPGSKGEVGSMTAKELLKLQPKLKGDRGDPGPPGLPGPPGIPGEKGECVFPPFR
GSPGSELWNEGDFGSGDDQGSPGPPGPHGLGLPGMEGRKGDRGERGSPGLMGQKGEPGTD
GIPGSPGPRGMPGPPGPPGLAPGHTNLFDLDGAYGSGLYPSSGDGPFGPYVGRPGTPGVQ
GPPGLPGTPGLRGERGYPGEKGDRGAPGARGEKGEQGIPGIPGEKGDRGLDGRDGIPGLP
GLKGESGEKGDRGPPGIGTPGPPGPPGLNAVYRGANDDLEYGTLGQKGDRGDPGPQGEKG
DSGEKGDRGQRGKLGNVGPAGPKGDPGVPGPPGPPGITSVLSQEGETPVFLKGEKGERGR
RGKKGKIGPPGPPGPVGPMGEIGLPGFPGRPGPPGKPGAKGEPGDSVKGEKGEQGPIGPP
GIGGYLDPEGVSVVSIGPKGDRGDVGPVGPPGLAGKPGEKGEPGRPGVEGKKGEPGAPGP
PGGLGDEGGIISIPGPPGPPGPVGPPGDSIKGAPGPPGPPGPPGSGRLNPFWTGTENAAR
RAYRGIKGLRSFARTKGSQVFPGPPGPPGPPGPPGPPGKTAFHNPPEELRRPTVVPGAVT
FKNMDTLLRMSEISPLGTLAFVLEEESLLVRVSEGWQYVALGSLVVQSTPSPTKPPTTYA
PFSPPVDNLRLEKAPRIWRKLRMAALNQPFPGDMHGIRGADYECYRQSRRANLRGTFRAF
LASQVQNLDSIVRFQDVGLPVVNLKGEVVFNAFKDIFTGAGAPFPYPPRIYSFDGRNVLA
DNRWTQKLVWHGSDKHGVRDLESFCDAWHTGGLDKVGMASSLLRGRLLDQERYSCNNSFI
VLCIEATSQEDYKRRRKRRTDDDEEREMTWEEFLAAVEDTDLEKAESEV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgggttttcttggattttatttattggtgagagatgatgatgactttcctccattctcg
tctgaagctccaggtaaagcagatcaagcagctgttttgatgtcgtttgcttttgcaggt
ccacccccattgataactcctcctccccctggtcctggatatcttggcattgaaagaact
acggtgaaaggtcaaaaaggcagagcaggaagacatggaaaacctggatctaaggtgaga
gatgatgacgactttcctccattctcgtctgaagctccaggtaaagcagatcaagaaaat
ctcatgaagaaggatctaccagatgggcagcaggttataggcacctacaaagacacgcta
attgctacagccaagaacaattttgaaaccatgtctcttgtatccgacgaagaagccgat
gcgatgctatttctttatatgcagcatgcaatagaatactcggatcatgctaagatcacc
gtgaaaactgttgacagggatgatatagagactgctatattccgagttccgaaactgcaa
gagctatgggtggagtatggaagtggaaaacagtatctgcggtatctttccatccacgtt
ttgcacccagctgttttgatgtcgtttgcttttgcaggtccacccccattgataactcct
cctccccctggtcctggatatcttggcattgaaagaactacggtgaaaggtcaaaaaggc
agagcaggaagacatggaaaacctggatctaagggagaagtaggatcaatgacggcaaaa
gaactattgaaactacaaccgaagctaaaaggcgatagaggagatcccggacctcctgga
ttgccgggacctcctggaattccaggagaaaagggtgaatgcgttttccctcctttcaga
ggcagtcccggttcagaactttggaacgaaggtgattttggttcaggagatgaccagggc
tcgcctggaccacccggtcctcacggactaggccttcccggaatggaaggacggaaggga
gatcgaggcgaaagaggctcccctggactcatgggtcagaaaggagagccgggtactgat
ggaatacctggaagtcctggacccagaggaatgccaggacctcctgggcctcctggttta
gcacctggacatacaaatctctttgacttagacggtgcttatggttctggtttgtatcca
agctctggggatggtcccttcggcccctatgttggccgaccaggtacccccggagttcag
ggtccacctggacttccaggcactccaggattacgaggagaacgaggctatccgggagaa
aaaggggatcgtggtgctcctggggctagaggcgagaaaggagaacagggaatacctggc
atacctggagaaaaaggtgatagaggattggatggaagagatggaattcctgggttgcct
ggcttaaaaggagaatctggtgaaaagggtgaccgaggaccacctggtatcggtacccct
ggtccaccaggtccacctggccttaatgcagtttatagaggggctaacgatgacctggaa
tatggaactcttggacaaaagggtgatcgaggagatccaggacctcaaggtgaaaaaggc
gattccggtgaaaagggtgatcgtggacaaaggggcaagctcggcaacgtcggtccagcc
gggcctaaaggagatccgggagtaccaggacctcccggacctcctggtattacttctgtg
ctatctcaagaaggagaaacgccagtgtttctaaaaggtgaaaagggtgaaagaggtaga
agaggtaaaaaaggaaaaattggaccaccaggtcctccaggaccggtcggaccaatggga
gaaataggcttaccaggttttccgggtcgccctggtccacccggaaaacccggtgccaaa
ggagaacctggtgacagtgtcaaaggcgagaaaggtgaacaaggtccaataggtccccca
ggaataggaggatacctagatccggaaggtgttagcgttgtcagcattggccccaaaggt
gacagaggtgatgtcggtcctgtaggtccaccaggattggctggaaagcctggagagaaa
ggtgaacctggacgacctggagtagaagggaaaaagggcgagcccggtgcaccaggacca
ccgggtggtttgggagatgaaggaggcattatatctattccagggccgccaggaccacct
ggtccagtgggacctcccggtgattccataaaaggtgctcctggcccacctggtcctcct
ggacctccaggaagtggtcgcttgaatccattctggacaggaacagaaaacgctgcacga
agagcatacagaggaattaaaggcttgagatcattcgctagaacaaaaggatctcaagtg
tttcctggacctccaggtcctccaggaccacctggacctcccggtccaccaggaaaaact
gcattccacaatcctcctgaagaactccgaaggccgaccgtcgtacctggggctgtgaca
ttcaagaacatggacactctactgcgcatgtctgaaataagtcctttaggtacattagca
tttgttttggaggaagaatctcttctagttcgtgtcagcgagggatggcaatacgtagct
cttggatcattagttgtacagtctactccaagcccaactaaacccccgacgacatatgcg
ccatttagtcctccagtggataatttaagactggaaaaagctccacgaatatggagaaaa
cttcgtatggcagccctaaaccaacctttccctggtgacatgcacggcatccgcggcgca
gattacgaatgttatcgacagtctcggcgtgctaacttgcggggaacattccgagctttc
ctcgcatcccaagtccagaatctcgatagcatcgtgcgcttccaagatgttggactgcct
gtcgtcaatctcaagggggaagtcgtttttaatgcatttaaagatatctttaccggagct
ggtgctccattcccgtatcctcctagaatatattccttcgatggacgaaatgttttagct
gataaccggtggacacagaagctcgtctggcacggatctgacaagcacggtgtcagagac
ctcgaatccttctgtgatgcttggcacactggaggactggacaaagtgggcatggccagt
tctctcctgaggggtcgcctcctggatcaggagaggtattcctgcaacaactccttcatt
gtgctgtgtattgaagctactagccaggaggactacaaaaggaggagaaaaaggcgcaca
gacgacgacgaagagagggaaatgacgtgggaagaatttctggctgcagttgaggacacg
gacttagagaaagcagagtcagaagtttaa
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