Uloborus diversus: 129221180
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Entry
129221180 CDS
T09235
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
udv
Uloborus diversus
Pathway
udv03018
RNA degradation
udv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129221180
09123 Folding, sorting and degradation
03018 RNA degradation
129221180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129221180
03041 Spliceosome [BR:
udv03041
]
129221180
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129221180
mRNA degradation factors
5'-3' decay
Lsm complex
129221180
Spliceosome [BR:
udv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129221180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
129221180
NCBI-ProteinID:
XP_054711611
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All DBs
Position
1:128174268..128202996
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AA seq
96 aa
AA seq
DB search
MASTLDSYVNHTVSIITADGRNIVGTLKGFDQTINLILDESHERVYSSSQGIEQVVLGLY
IVRGDNVAVVGEVDDELDARLDLTNIKAEPLNPVIH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacgcttgatagttatgtgaatcatacggtgtcaataattactgctgatgga
agaaatattgtgggaactctgaaggggttcgatcagaccatcaatttgatcctggatgag
agccatgaaagggtctatagctcctcccaaggcattgagcaggttgtcttgggtctttac
atagtcagaggagacaatgttgctgtagttggagaagtagatgatgaactggatgcaaga
ctagatttgaccaacatcaaagcagagcctctgaatcctgtcatccactga
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