Uloborus diversus: 129221195
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Entry
129221195 CDS
T09235
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
udv
Uloborus diversus
Pathway
udv03022
Basal transcription factors
udv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129221195
09124 Replication and repair
03420 Nucleotide excision repair
129221195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129221195
03036 Chromosome and associated proteins [BR:
udv03036
]
129221195
03400 DNA repair and recombination proteins [BR:
udv03400
]
129221195
Enzymes [BR:
udv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129221195
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129221195
Chromosome and associated proteins [BR:
udv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129221195
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129221195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SNF2-rel_dom
nSTAND3
Motif
Other DBs
NCBI-GeneID:
129221195
NCBI-ProteinID:
XP_054711622
LinkDB
All DBs
Position
4:5515122..5576712
Genome browser
AA seq
760 aa
AA seq
DB search
MKVNIDGLLVYFPYDFIYPEQYSYMLELKRSLDAKGHGLLEMPSGTGKTLSLLSLIVAYH
KAHPAEVTKLVYCSRTIPEIEKVLQELRRLLTYIEKETGQVNKIVGLCLSSRKNLCCHPQ
VSREKDGRIVDGKCFALTASHKRGMAAVDPNVDICAYFEAFDRNGKEFPLPAGVYDLDDL
KDYGKKNGWCPYFLARHAITQATIVVYSYHYLLDPKIADLVSKEISKSSVVVFDEAHNID
SVCIDSMSVDITKRTIERSHHGIQILEKNCIRIKETDAKKLKEEYQRMVQGLKDVGIARE
TDIVLSNPVLPDEILNEAIPGNIRSAEHFIAFLKRFLEYVKMRMRVQHVVQESPAAFLKD
ILQKVCIERKPLRFCAERLRSLVRTLEITELNDMSSLTSLCNFATLASTYMKGFTIIIEP
FDDRTPSVPNPILHFSCMDASVAIRPVFQRFQSVIITSGTLSPLDMYPKILDFRPVIMAS
FTMTLARPCLCPMIVSKGNDQVSMSSKFETRDDIAVIRNYGNLLVDMCGIVPDGIVGFFT
SYTYMEAVVAAWYEQGIIDNILKKKLLFLETQDSGETSLALLNYVKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRCVIMFGIPFVYTQSRILKSRLEYLRDQFQIRESDFLTFDALRHA
SQCVGRAIRGKTDYGIMIFADKRFSRADKYGKLPKWIQEYLEESLHNLSIEEAVQIAKRF
LRQMAQPFTREDQLGISLLTLEQLESEEIKKKIESRVQLL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaatattgatggtctattggtatattttccgtatgatttcatctatccagag
caatattcctatatgcttgaattgaaacgaagtcttgatgctaagggccatggactttta
gagatgccttctggcactggaaaaacactctccctgctatctctgattgttgcttatcat
aaggcccatcctgccgaagtgaccaaattagtttattgctctcgaacaattccggaaatc
gaaaaggttcttcaagaactgcgccgtttacttacttatattgagaaagaaacaggccaa
gtcaataaaattgttggcttatgtttgagttctcgaaaaaatctctgctgccatccacag
gtcagtagagaaaaggatggaagaatagtcgatggcaaatgctttgctttaacagcttct
cataagcgcggtatggctgctgttgatccaaatgtagatatttgtgcctactttgaggct
tttgatagaaatggaaaagaatttcctctgccggctggcgtatatgatttggatgatttg
aaggattatgggaagaagaacggatggtgcccatattttttggctcgacatgctatcacc
caagctaccattgttgtgtacagttaccactacttattagacccaaaaattgctgattta
gtttcaaaagaaatttctaagtcatcggttgtagtttttgacgaggcacataacatagac
agtgtttgtattgattctatgagtgtagatataacaaaaagaactattgagaggagtcat
catggtattcaaatactggaaaaaaactgtattagaattaaagaaactgatgctaaaaaa
ttaaaagaagaatatcaaagaatggttcaagggctaaaagatgtaggcatcgccagagaa
accgatattgttttatccaatccagttcttccagatgaaatcctcaatgaagcaatacct
ggaaacattagaagtgctgagcatttcattgcatttttgaagaggtttttggagtatgtt
aaaatgagaatgcgagtgcagcacgttgtacaagaaagtcctgctgcctttttgaaggat
attttgcagaaggtatgcattgaaaggaaacctttgaggttttgtgctgaaagacttcga
tcgttagtgagaacactggaaattaccgagttaaatgacatgtcttctctcacatcgctc
tgcaattttgctactcttgcaagcacttacatgaaaggtttcacaattattattgagcct
tttgatgatcgtacgccatctgtgccaaatccaattctgcattttagctgtatggatgca
tcagtggctattagacctgtgtttcaaagatttcaatctgttatcattacttcagggact
ctttctcctttggatatgtacccaaaaattttggattttagacctgttataatggcttct
tttactatgacactagctagaccatgtctttgcccaatgatcgttagtaaaggaaatgat
caagtttctatgtcatcgaaatttgaaaccagagatgatatagctgtaatccgtaactat
ggcaatctacttgttgacatgtgtggtattgtaccagatggcattgttggatttttcaca
agttatacttacatggaagcagttgtagcagcttggtatgaacagggtatcatagataac
attttgaaaaagaaattgctatttttggaaactcaagattccggagaaacgagtctggct
ctcctaaattatgtgaaggcttgtgaaaatgggagaggtgcggttttactttctgttgcc
agagggaaagtatctgaaggagttgattttgatcatcatcttggaagatgtgtcatcatg
tttggaataccttttgtttacactcaaagtcgaatattgaagtctcgtcttgagtacctg
agagatcaatttcaaattagagaaagtgattttcttacttttgacgccttgaggcatgct
tctcaatgtgttggccgggccatcagagggaaaacggactatggtatcatgatttttgca
gacaaaagattttctcgagcagataaatatgggaaattgccgaaatggattcaagaatat
ctggaggaatctttgcataatttgtctattgaagaagcagttcaaattgccaaaaggttt
ctgcgacaaatggcccaaccatttacaagggaagatcaattggggatatcgctattaacc
ttagaacaactggaatctgaagaaattaagaaaaaaattgaatctagagttcaactcttg
tga
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