Uloborus diversus: 129221608
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Entry
129221608 CDS
T09235
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
udv
Uloborus diversus
Pathway
udv03020
RNA polymerase
udv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129221608
09124 Replication and repair
03420 Nucleotide excision repair
129221608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129221608
03400 DNA repair and recombination proteins [BR:
udv03400
]
129221608
Enzymes [BR:
udv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129221608
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129221608
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129221608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
129221608
NCBI-ProteinID:
XP_054712104
LinkDB
All DBs
Position
4:83205122..83251209
Genome browser
AA seq
1175 aa
AA seq
DB search
MYEPEDENFEEDDSEEITADLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DTPQIDLQAEAQHSSGEVETPPRYLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVLKDGEEPVETQLQKSFIGKIPIMLRSTYCLLSGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNSVYVFQMKDSKYAYKSECRSCLEHSSRPTSTLWVNML
ARGGQGVRKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDQEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRTLTKEVRMYAQ
KFIDRGKDFNLELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIAEATKIFVNGCWVGIHRDPDQLMNTLRKLRRQMDIIVSE
VSMVRDIRDREIRIYTDAGRICRPLLIVENQKLLLKKRHVDRLKEREYNNYSWQDLVANG
VVEYIDTLEEETVMLAMTPDDLQEDKGQAYCSTYTHCEIHPSMMLGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSI
VAIMSYTGYNQEDSIILNASAIDRGFFRSVFYRAYKDAEQKQIGDQEEQFEKPTRETCQG
MRNAIYDKLDDDGIIAPGTRVSGDDVIIGKTITLPENDDELESTTRRFTKRDASTFLRNS
ETGIVDQVMLTLNSDGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGITYRQEDMPFTAE
GLTPDIIINPHAVPSRMTIGHLIECLQGKVSANKGEIGDATPFNDTVNVQKISNLLQEYG
YHLRGNEVMFNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRVHVCNLCGLFAIANLKNNTFECRG
CRNKTQISQITVPYACKLLFQELMSMSIAPRMMVI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagccagaagatgaaaattttgaggaggatgattcagaggaaattactgcagac
ttgtggcaagaggcttgttggatcgtcatcagtgcatattttgatgagaaaggtctggtt
cgtcagcagctggactcctttgatgaatttatccaaatgtcagtgcaacgcattgtggag
gacacaccacagatcgatttgcaggcagaagctcaacattcttctggagaggttgaaaca
cctccccggtatctagtaaagtttgagcaaatttatctctccaagccaacacattgggag
aaagatggtgcaccaagccctatgatgcccaatgaagcaagattgagaaatcttacgtat
tcagctccactatatgttgatattactaagactgtgttgaaagatggtgaagagccagtg
gagacacaattgcagaagagctttataggcaaaattcccatcatgttacgatctacctat
tgcctcttgagcggattgactgatcgtgatttaactgagttaaatgaatgtccacttgac
cctggtggttattttattatcaatggatccgaaaaagtccttattgcccaagagaaaatg
gctacaaattcagtgtatgtatttcaaatgaaagattcaaaatatgcttacaaatcagag
tgcaggtcttgtttggaacattcttcacgtcctacaagtaccttgtgggtcaacatgctt
gccaggggtggacaaggtgtgcgaaagagtgctattggccagagaataattgctattttg
ccttatattaaacaagaaataccgatcatgatagtttttcgtgctcttggttttgtggct
gatagagacattttggaacatatcatttatgattttgaagatcaagaaatgatggaaatg
gtcaaaccgtcattagatgaagcttttgttatacaagaacaaaatgtagccttgaatttc
attgggtctcgtggtgctagacctggtgtaactaaggaaaagagaattaagtatgcaaga
gaaatcttgcaaaaggaaatgttacctcacgttggtgtgagtgatttttgtgaaacaaag
aaagcatattacttaggctacatggttcaccgattattgcttgctgctcttggacgacga
gaattggatgatcgagatcattatggaaataagcgtttggatttagctggaccacttttg
gcatttttgttccgtggtctgtttcgaactctgactaaagaagtcaggatgtatgctcag
aagttcattgaccgtggaaaggactttaatttagaattggccatcaagacccgtatcatt
acagatggattaagatattctttagctactggtaattggggagatcaaaagaaagctcat
caggcaagagctggtgtctctcaggtgttgaatcgattgacatttgcttcaacactctct
catttgaggcgtgttaactctccaattggaagggatggtaaacttgctaaaccacggcaa
cttcataacactctttggggcatgatttgtccagctgaaactccagaaggtcacgctgta
ggtttagtcaagaatcttgcattgatggcttatatttctgttggatctcaaccttcacca
atcttggagtttttggaagaatggagtatggaaaatctggaagaaattgctccctctgcc
attgcagaagctactaaaatctttgtaaatggctgttgggtgggaatccatcgtgatcct
gatcagctaatgaataccttacgcaagctacgaaggcagatggacatcattgtgtctgag
gtatcaatggttagagacattagagatagagaaatacgtatctatactgatgctgggaga
atctgtcggccattgctcattgtcgaaaaccagaaattacttctgaagaaaagacatgtg
gatcgcttgaaggaaagagaatataacaactacagttggcaagatctggtagcaaatggt
gtcgttgaatatattgatactttagaagaagaaactgttatgcttgcaatgacgcctgat
gatcttcaagaagataaaggtcaagcatattgttcaacttatactcattgtgaaatccat
ccttctatgatgcttggagtgtgtgcatccatcattccgtttcctgatcataatcagagt
ccccgtaatacttaccaatctgctatgggtaaacaagctatgggggtgtatatcaccaac
ttccatgtacgaatggacactctggctcacgtattgtactatcctcaaaagcctctggtt
accactcgttccatggagtacttacgtttccgtgaactgccagctggaatcaactctatt
gtagcaattatgtcatacacaggatataatcaagaagattcaattattttgaatgcatct
gcaattgatagaggcttctttcgctcagtgttttatcgagcgtataaagatgcggagcaa
aaacaaattggtgatcaagaggaacaatttgagaaacctactcgggagacttgccaaggc
atgagaaatgctatttatgacaaattagatgatgatggaattatagctcctggcacaaga
gtttctggagatgatgttattattggtaaaactattactctgccagaaaatgatgatgag
cttgagagtactactaggcgtttcactaaaagagatgctagcactttcttaagaaacagt
gaaactggaattgtggatcaagttatgttaactcttaattctgatggatataagttctgc
aaaattcgagttcgttctgttcgtattcctcaaattggagacaaatttgcatccaggcat
ggacaaaaaggaacctgtggtattacttaccgtcaagaagatatgccttttacagctgaa
ggtcttactcctgatatcattatcaatcctcatgctgtcccttctcgtatgacaattggc
catttaattgaatgccttcaaggcaaagtgtctgcaaacaaaggagaaataggagatgca
accccatttaacgatactgtcaatgtgcaaaaaatttctaacttgctccaagaatatgga
taccatcttagaggaaatgaggtaatgttcaatgggcatactggccgcaaaattaatgca
cagattttcttaggcccaacatactaccaacgtttaaagcatatggtagatgacaaaatt
cactccagagctagaggaccagtgcaaatattagtgcgtcaacctatggaaggcagagct
agggacggaggtctccgttttggggagatggaacgagattgtcagattgcccatggtgca
gctcaattccttagagaaagattatttgaagtatctgatccatatcgagtgcatgtatgc
aatctctgtggtctatttgctattgcaaaccttaaaaataacacttttgagtgcagaggg
tgccgtaacaagacacagatatctcaaattactgtcccatatgcttgcaaactacttttc
caggagttaatgtccatgtctatagctcctagaatgatggtcatttga
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