Uloborus diversus: 129221611
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Entry
129221611 CDS
T09235
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
udv
Uloborus diversus
Pathway
udv03040
Spliceosome
udv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129221611
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129221611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
udv03041
]
129221611
04121 Ubiquitin system [BR:
udv04121
]
129221611
03400 DNA repair and recombination proteins [BR:
udv03400
]
129221611
Enzymes [BR:
udv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129221611
Spliceosome [BR:
udv03041
]
Complex B
Other components
Prp19 complex
129221611
Complex C
Prp19-CDC5 complex
129221611
Ubiquitin system [BR:
udv04121
]
Ubiquitin ligases (E3)
U-box type E3
129221611
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
129221611
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
DSE1_N
Beta-prop_WDR36-Utp21_1st
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_SCAP
ASA1
Beta-prop_HPS5
Beta-prop_EIPR1
NBCH_WD40
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_DCAF4
WDR90_beta-prop_4th
U-box
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_RIG_2nd
eIF2A
zf-Nse
B-prop_COPA_B_2nd
Beta-prop_ACSF4
WD40_like
PAS_11
Motif
Other DBs
NCBI-GeneID:
129221611
NCBI-ProteinID:
XP_054712106
LinkDB
All DBs
Position
4:complement(17086344..17133195)
Genome browser
AA seq
505 aa
AA seq
DB search
MSLCCALSFEVPEQPVLSPVSGSIFEKRLIVKYIQEKGTDPINGKELTVDSLIDIKTPSV
VKPRPPSATSIPAILKTLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVILRL
TKEVTAAREALATLKPQAGIAAAPVGAQQPQYGVEAAGVADQPMEEAGMTPEVIQKLQDK
ATLLTTERKKRGKSVPEDLIKPEQIRQFQTLASHPGLHSAGVPGILALDVCPSDTSKILT
GGNDKNATLFNKDTEQVITILKGHTKKVTSVIFHPEEDTVITASPDSMIRIWHVPTSQTV
QAIRAHEGGVTGLSLHATGDYLLSTSNDEHWAFSDLRTGRVLTKVGDTTTAHSLTTAQFH
PDGLIFGTGTSDSLIKIWDLKERANVANFPGHSGPISAIAFSENGYYLATSADDSVVKLW
DLRKLKNFKTITLDEAYEVKSLCFDQSGTYLAVAGSDIRIYLCKQWDNLKTFSDHTALAT
GVRFGNHAHFLASVSMDRTLKIYGL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttgctgtgccttgagctttgaggttcctgagcaacctgttttgtctccagta
tctggaagtatatttgagaagcggctgattgtcaaatacattcaagaaaaagggacagac
ccaattaatggcaaagaactcaccgtagatagtctgatcgatatcaagactccctctgtt
gtaaaaccaagaccaccttctgccaccagcattccagcaattttgaaaacacttcaagat
gaatgggatgctgttatgctgcacagttttaccttgagacagcaattgcaaacagcacgt
caagaattatcccatgctttgtaccagcatgatgctgcttgtcgtgtcattttgcgactc
accaaagaagtaacagcagcacgtgaagctttggccacactgaaaccacaagctggtatt
gctgcagctcctgtgggtgctcaacaacctcaatatggtgtagaagcagctggtgttgct
gatcagcctatggaagaagcaggaatgacacctgaagttattcaaaagcttcaagacaaa
gctactcttttgactactgagagaaagaagagaggcaagtcagttccggaagatttaata
aaaccagagcagattcgacaatttcagaccctggcttcccatcccggtttacacagtgct
ggtgttcctggaattttggcattggatgtctgcccctctgataccagcaaaattctgact
ggaggcaacgacaaaaatgcgacactcttcaacaaagacacagagcaagtcatcaccatc
ttaaaggggcatacaaagaaagtcacttctgtgatctttcatcctgaagaggatacagta
attaccgcatctcccgattcgatgattcgtatctggcacgttccaacttcacagacagtc
caagccattcgggctcacgaaggtggtgtgactggtctcagcttgcatgccactggtgat
tacctgctgagtacatccaatgatgagcactgggccttctctgacctacgtactggacgt
gtgctcaccaaagttggggatacaactactgcacattcattgactacggcccagtttcac
cctgacggtttgattttcggtactggaacttcagattctcttataaagatatgggatttg
aaagaacgtgctaatgtcgctaatttcccagggcactctggccctatatctgccatagcg
ttttcggagaacggctattacctggccacttctgctgatgattctgttgtcaagctgtgg
gatttaagaaagctaaagaacttcaagactataaccctggatgaagcttatgaagtgaaa
tctctatgctttgatcaaagtggaacctatctagctgtagcaggttctgatattaggata
tacttgtgcaaacagtgggacaatttgaaaaccttttctgaccacacagcccttgcgaca
ggtgtcagatttggtaatcacgctcacttcctggcgtctgtcagtatggatcgtacactg
aagatatatggactttaa
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integrated database retrieval system
