Uloborus diversus: 129222186
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Entry
129222186 CDS
T09235
Name
(RefSeq) exosome complex exonuclease RRP42-like
KO
K12589
exosome complex component RRP42
Organism
udv
Uloborus diversus
Pathway
udv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129222186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129222186
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129222186
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
129222186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
129222186
NCBI-ProteinID:
XP_054712628
LinkDB
All DBs
Position
5:98096924..98123565
Genome browser
AA seq
287 aa
AA seq
DB search
MANFVLQEAEKVYIVHGIQENLRGDGRNNMDYRMIEIETGVIPNSCGSAIIKIGDTKLLA
GVSAEIKAPLAQAPNRGWIEVSIESTPHANSDFEKKSGSEFGIDVTQVLNQICNYENLVN
LRSLCVIPGQQVMVLYVDIMVLGYDGNLMDAASIVTKAALYDTKLQSFIVKKDGDNEPEV
EFTDDEYDVFSVDVTNLPVLVTLFRIGSEFIVDATGDEEACNKCKLLLAISSAEIVMMKE
MGGPGSLHIESIHDVIEVSQNMGLQLQRQLMDILKSERNNAEKVIFL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggctaactttgtactccaagaagccgaaaaagtttatattgttcatggtattcaagaa
aatttaagaggagatggaagaaataatatggattatcgcatgattgaaatagaaactggt
gtaattcctaatagttgtggatcagctatcataaaaattggggatactaaacttctagca
ggtgttagtgcagaaataaaggctccattagctcaagctcctaatagaggttggattgaa
gtgtctattgaaagcacaccacatgctaattcagactttgagaaaaaatctggatctgaa
tttggaattgatgtaactcaggttttgaatcaaatctgtaattatgaaaatcttgtcaat
ttaaggtctctatgtgttattcctggacaacaagtaatggtgttatacgttgatataatg
gtattaggttatgatggaaatctcatggatgcagcttccattgttacgaaagcagctttg
tatgacacaaaacttcagtcttttattgtaaagaaagatggcgacaacgaacctgaagta
gaattcacagatgatgaatatgatgttttttccgtagatgttacaaatctgccagtgctc
gttacattatttaggattggcagtgaattcatcgttgatgccactggagatgaagaagcc
tgtaataaatgcaaattacttcttgcaatatcttctgctgaaattgtaatgatgaaagaa
atgggaggtccaggaagtctgcatatagaaagtattcatgatgttattgaagtttctcaa
aacatgggcttacaattacaaagacaattaatggatattctgaaatctgaacgaaacaat
gcagaaaaggttatttttctttga
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