Uloborus diversus: 129223399
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Entry
129223399 CDS
T09235
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
udv
Uloborus diversus
Pathway
udv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129223399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129223399
03009 Ribosome biogenesis [BR:
udv03009
]
129223399
03036 Chromosome and associated proteins [BR:
udv03036
]
129223399
Enzymes [BR:
udv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
129223399
Messenger RNA biogenesis [BR:
udv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
129223399
Ribosome biogenesis [BR:
udv03009
]
Eukaryotic type
90S particles
RNase
129223399
Prokaryotic type
rRNA processing factors
129223399
Chromosome and associated proteins [BR:
udv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
129223399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
129223399
NCBI-ProteinID:
XP_054713969
LinkDB
All DBs
Position
5:complement(99840520..99938825)
Genome browser
AA seq
899 aa
AA seq
DB search
MPKYEPPVRKTKLRKLKPPKADCDSESSSSSENSSDDEEDTAMEELEKKRKHPYRLHHEL
WYNDPKEMNDGPLCRCSAKARRSGIRHGIYAGEEHLPLCNPLSNNANRLHHYRITMKPHT
NFLTSSPTIISHEGKNYVFEGFSMFSHSPLPKLPNCKVIRFNYEYTILYLEEDGPTNFTI
QGLELFSKFLLVEILELVDLNWKAHDDPDGCPRFHFLPRFAREVHGNKKELLSLNVVLQY
LLHANKLLVDEAKLPKILAKSSLEWQDIADDVKGMIVTCPGMKPSSIRVDQFDREKCESN
TSDFPVIVHFGVRPPQLSYAGNPQYQKAWREYVKFRHLVANKPKVKYVDRHELTKKEMKL
QEMRLENDLKRDVTVVVSSKGFYKTGIMSDIIQHAMVLPVLVCHLRFHDSLKILEDKIGY
HFQDRFLLQLALTHPSYRENFGTNPDHARNSLTNCGLRQPQYGDRRIHYKNTRKRGINTL
INIMSRFGSQKESASYINHNERLEFLGDAVVEFLSSIHLFYMFPDLEEGGLATYRAAIVQ
NQHLALLAKNLQLEKFMLYAHGSDLCHDLELRHAMANCFEALMGALFLDNGIEVADKVFA
ITLFTEPQLLAVWKNYPLHPLQEQEPGGDRRWIESVPLLQKLHKFEETIGIEFTHIRLLA
RSLTHRSLGYNNLTLGSNQRLEFLGDTVLQLVASEYLYKFFPEHHEGHLSLLRSSLVNNR
TQAVVCQDLGMVEYAIYPHDKVELKPKDKADLLEAFLGALYVDKDLGYCRKFCEVCFFPR
LQDFIMNQDWNDPKSKLQQCCLTLRSMDGGEPDIPTYKVIECMGPTNTRVYSVAVYFQGN
RLAVGSGHSIQQAEMDAASNALQKSKDLFPQLKHQQRTIERSLGPRKKTSSSSRQKPKS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagtacgaacctcctgtaagaaagacaaaattgagaaaactgaaacctcctaaa
gctgattgtgatagtgagagttctagcagtagtgaaaactcttctgatgatgaggaagat
actgcgatggaagagctggaaaaaaagagaaagcatccatatcgtcttcaccatgaattg
tggtataatgatcccaaagagatgaatgatggtcctttgtgtagatgcagtgctaaagct
agacgatctggaattcgtcatggtatctatgctggggaagagcatttacctttgtgtaat
cccttgagtaataatgcaaacagattacatcattatagaataactatgaaacctcacaca
aatttcctgactagctctccgaccatcatatctcatgaaggaaaaaattatgttttcgag
ggattttcaatgttttctcactcacctttacccaaacttccaaattgtaaagttatccgt
tttaattatgaatataccatcttgtacttagaagaagatggccctactaattttacaatt
cagggacttgaattgttttcaaagtttctactggtggaaatattagaacttgtagatttg
aattggaaggctcatgatgatccagatggttgtcctcgcttccattttttgcctagattt
gcacgagaagtacatggtaacaaaaaagaattgctgtcattaaacgttgtgttacagtac
cttctacatgctaataaattgcttgttgatgaagcaaagctgcctaagattttagctaaa
agcagccttgaatggcaagatatagccgatgacgtgaaaggaatgattgtcacttgtcct
ggtatgaagccgtcttccatacgtgttgatcaattcgatagagaaaaatgtgaatcaaac
acttcagatttcccggttattgtgcattttggagttcgacctccacagcttagttatgct
ggaaacccacagtaccaaaaagcttggcgagaatacgtgaaatttcgtcatttggtggct
aataaacctaaagtcaagtatgttgataggcatgagttaactaaaaaagaaatgaaactg
caagaaatgagattggaaaatgatttaaagcgagatgttactgttgtcgtaagcagtaaa
ggtttctataaaactggaatcatgagtgatataattcagcatgccatggttctacctgtt
cttgtttgtcatttgaggtttcatgattctttaaagatcttagaagataaaattggttac
cactttcaggatcgtttcctgctgcagcttgccttgacacacccttcctatagagaaaac
tttggtacaaatccagaccatgcccgcaattcattaactaactgtggattgaggcagcct
cagtatggtgatcggcgcatacattataagaacaccagaaagagaggaataaatacttta
atcaatataatgtctcgatttggaagccagaaggagtcagcatcttatatcaatcacaat
gagagattagaatttttaggtgatgctgttgtggaatttctttctagtatacatctattc
tacatgtttcctgatcttgaagaaggaggacttgctacttatcgtgctgcaattgtacaa
aatcagcacttagcacttttagctaaaaaccttcaattagagaagttcatgttatacgca
catggatctgatttgtgtcatgatttggaattgaggcatgctatggctaattgctttgaa
gcattaatgggtgctttatttttggacaatgggatagaagttgctgataaggtgttcgcc
attactttgtttactgaaccacaacttcttgctgtgtggaaaaattacccccttcatcct
cttcaggaacaagaacctggtggtgatagaagatggatagaatctgttcctttgctacaa
aagctgcataaatttgaagaaactattggcatagaatttactcatatacgtctgcttgca
agatctttaactcatcgcagcttgggatacaataacttgactctgggctcaaatcagagg
cttgaatttttgggagacactgtacttcagctggttgcatctgagtatctttataaattc
ttccctgagcatcatgaaggacatctgtctctattgaggagctctcttgtaaataatcga
actcaagcagtggtttgtcaagatttaggaatggtagaatatgctatttatccacatgac
aaagttgagctgaaacccaaggataaagcagatctactagaagcttttctgggagcttta
tatgttgacaaagatcttggctactgcagaaagttctgtgaggtttgtttcttcccaagg
ctacaggattttatcatgaatcaagactggaatgatccaaagtcgaaacttcagcaatgt
tgccttaccttgcgctcaatggatggtggagagccagatattccaacatataaagtgatt
gaatgcatgggccctacaaacacacgtgtgtattctgtagcagtgtattttcaaggcaat
cgattggctgttggatctggacatagcattcagcaagctgaaatggatgcagctagtaat
gctttacagaaatctaaagatctgtttcctcagttaaaacatcagcaaagaaccattgag
agaagcttgggaccccgaaagaaaacatccagttcttcaagacaaaagcctaaatcatga
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