Uloborus diversus: 129224532
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Entry
129224532 CDS
T09235
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
udv
Uloborus diversus
Pathway
udv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129224532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
udv03041
]
129224532
03009 Ribosome biogenesis [BR:
udv03009
]
129224532
Enzymes [BR:
udv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129224532
Spliceosome [BR:
udv03041
]
Complex A
U1 snRNP components
U1 related factors
129224532
Complex B
129224532
Ribosome biogenesis [BR:
udv03009
]
Eukaryotic type
Pre-60S particles
Helicases
129224532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
129224532
NCBI-ProteinID:
XP_054714974
LinkDB
All DBs
Position
6:60367247..60420347
Genome browser
AA seq
869 aa
AA seq
DB search
MSGRDRMGRRGGDRPGFGGRRGGGSVRGGRGSFKGKQPGERLRKPRWDLSKLMPFQKNFY
REHPNVQRRSQQEAENYRRHFEITCHGQNIPKPVINFEEGCFPDYVMEAVRLQQYQQPTA
IQAQSWPIALSGRDMVGIAQTGSGKTLAYILPAVVHINHQPPLARGDGPIALILAPTREL
AQQIQQVANDFGHISRVRNTCVFGGAPKGPQIGDLERGAEICVATPGRLIDFLEANITNL
RRCTYLVLDEADRMLDMGFEPQIRKILEQIRPDRQTLMWSATWPKEVRALAEEFLDNYVQ
INIGALQLCANHNITQIVDVCEEWDKEQKLFKLLEEIVAEKDNKTIIFAETKRKVDELTK
KIRRDGWPAMCIHGDKSQPERDWVLNEFRSGRSPILIATDVAARGLDVDDIKFVINFDYP
NCSEDYVHRIGRTARSNKSGTAYTFFTSANGKQANDLIGVLKEANQNINPMLHDLADCRG
GGRMRNRHRGGPMRNDMRGNPRRDDPRGGRNMRDAPAPMRGNDRSGRPPVIDQRADSRNR
LGSGRPDRSGSERHHHRDEGNARDSRGFGGVSAQGQQQNYGRDAKRPGPEPPQNYGREPK
APLGPGFGAEVKGPQQQAYGREAKGPQQNYGRDAKGHQPQQGFGRDEQQQNYGRDSHGQQ
QGYGRESHGQQQGFGRDSHGQQGYGRTSQPQNYHREKDSPGFGNRENQSFNQGNARPSLL
SNPQGFQQPQEGRSGHDDRYGSRDRPQRPNDGGSRQHPSPQGMGHHGQYGPPRSDRNQAM
NSANQHHGPPPQGPYTRGMGQRPPTAGPPQQQHRMGSKAMTDAQTIQSLFQPPPPPPPIP
SSGPTSSSLTRAALLAPPPPPPPQMNGYY
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagagacagaatgggacgaagaggaggcgacaggcctggctttggtggccgc
agaggtggtggctctgttcgaggtggacgaggctctttcaaggggaagcagcctggagaa
aggctacgtaaaccacgttgggatctctccaagctgatgcctttccagaagaacttctac
agagagcatcccaatgtacagagaaggtctcagcaagaagcagagaactacaggcgtcat
tttgagatcacctgtcatggtcagaatatcccaaaacctgttatcaattttgaagaggga
tgttttcctgattatgtaatggaagctgttcgtctgcagcagtaccaacagccaactgcc
atccaagcccagagttggcccattgctcttagcggacgagacatggtgggcatagcgcag
actggatctgggaagactcttgcttacattctgccagcagttgtgcatatcaatcatcag
ccaccccttgctcgaggagacggccctattgccttgatactagctcccacccgtgagctg
gcacagcagatccagcaggttgcaaatgactttgggcacatttctcgtgtaaggaacact
tgcgtgtttgggggagctcctaaaggacctcaaataggcgacttagaaagaggtgccgaa
atctgtgtcgctactcctggccgtttgattgattttttggaggccaacataaccaacctg
cggcgctgcacctatctggtccttgatgaggcagaccgtatgctggacatgggctttgaa
cctcagatacgaaagatcctggagcagataagacctgaccgacagacacttatgtggagt
gcgacttggccgaaggaggttcgtgccttggcagaagagtttctagataactatgtacag
atcaacattggggcattgcagctctgtgccaaccacaacattactcagattgtagatgtc
tgtgaagaatgggacaaggagcagaaactttttaagttgcttgaagaaatagtagcagaa
aaagataacaaaaccattatctttgcggaaaccaagaggaaagtagatgaattaacaaag
aaaattaggcgtgatggttggcctgctatgtgcattcatggagataaatcacagcctgaa
agagattgggttttgaatgagtttcgaagtggccgttctcccatcctgatagccactgat
gttgctgcacgaggtcttgatgtggatgacatcaagtttgtaatcaattttgactaccca
aattgctcggaggactatgtgcatcgcattggacgaacagcccgcagcaacaaaagtggc
actgcatacaccttcttcacatcagccaatggcaaacaggcaaatgacttgattggagtg
ctgaaggaggccaaccagaatatcaatcccatgctgcatgatttagcagactgtagggga
ggtggaaggatgcgcaaccgacaccgtggaggtccgatgcgaaatgacatgcgtggcaac
ccaaggcgagatgatccaagaggtggacgtaatatgagagacgctcctgctcctatgagg
ggcaatgaccgtagtgggagacctccagtgattgaccaacgcgcggattccagaaaccga
ttgggcagcggtcgaccggatcggtctggatccgagaggcaccaccaccgagatgagggg
aatgccagggattcccgtggctttggaggagtttcagctcagggacaacaacagaattat
ggtcgagatgctaaacgaccggggccagaaccaccgcagaattatggccgggaacccaaa
gcacctttagggccagggtttggagctgaagtgaaaggaccacaacagcaagcttatgga
cgagaggccaaggggcctcaacaaaactatggccgggatgctaaaggacatcaaccgcaa
caaggttttggacgggatgaacagcaacagaactatggtagagattcccatggacagcaa
caaggttatggaagggagtctcatggtcagcagcagggatttgggcgtgattcccatgga
caacagggttatggaagaacttcccagcctcagaactaccatcgggaaaaggattcccct
ggcttcggaaatcgggaaaaccagagctttaaccagggcaatgcaaggccctcgttattg
tctaaccctcagggttttcaacagcctcaagaaggcagaagtggacatgatgatcgctat
ggatcacgtgacagaccacagaggccgaatgacggaggatctcggcaacatccatcccct
caagggatgggccaccacggacaatatggtccacctcgttctgacaggaatcaggcaatg
aatagtgctaaccaacaccatgggccacctcctcaggggccctacacccgtggcatgggc
caacgtccacctactgcaggacctcctcagcagcaacaccgcatggggtcaaaagcaatg
acagatgcgcaaacgattcagtctttgtttcaaccaccgcctccgcctccacctattcct
tccagtggccctacatctagcagtcttacaagagctgctcttttagctcctcctccacct
cctcccccacaaatgaacggatattactag
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