Uloborus diversus: 129225217
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Entry
129225217 CDS
T09235
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
udv
Uloborus diversus
Pathway
udv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129225217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129225217
03019 Messenger RNA biogenesis [BR:
udv03019
]
129225217
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129225217
RNA polymerase I system
129225217
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
129225217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
KOW7_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
SH3_KIN17_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
129225217
NCBI-ProteinID:
XP_054715761
LinkDB
All DBs
Position
6:26773277..26855931
Genome browser
AA seq
1079 aa
AA seq
DB search
MSDSEGSNYSGSENEESEAEQEDNKSEAGSDQESDGGVAEDEAEEVTEQEAAAEEPEGEE
EPEGEDLDEEDEEDEDDEDDDDDDDRGKRKRKKPRYGGFILDEAEVDDEVEEEEEWEEGA
EDIIDRTRPNEENTSRDIDSHRRLQMMWTSQKEDEIEDYYRRKYAESSAAEKGYGDGGDH
ELPDEIAQQTLLPGVKDPNLWMVKCRIGEEKSTVLLLMRKFIAYQYTEEPLQIKSVVAPE
GVKGYIYIEAYKQTHVKQAIAGVGNLRMGQYQQMMVPIKEMTDVLRVTKEQAQLKPKQWV
RLKRGLYKDDLAQVDFVNMAQNFVHLKLIPRVDYTKKRGALRSNNEQEKRKKGRKPVAKL
FDVDAIRALGGEVSTDGDYLIFEGNRYSRKGFLYKSFARSALIVDGVKPTLSELEKFAEK
SDTRSMEIELSETAQDEAGHSFSPGDNVEVCEGELIHLQGRVIAVDGNKVTMLPSHEDLK
EPLEFPAHELRKYFKMGDHVKVISGTYEGDTGLIVRVTDNFVLLFSDLTMHELKVRPQDL
QLCTDMATGVDSLGQFQWGDLVLLDAQTVGVIVRLEKENFHILNMHGNVVKVKHQSVSKR
KDTRRAVSLDSEQNQIQVRDVVKVIDGPHSGRQGEIKHLYRSFAFLHSRMMMENGGVFVC
KTRHLVLAGAGSGHARPLTEINMRSPFHAASPRLNSPMHPSGGGGKSPGGAGAGNLGLGG
AGRGRNRRDTELIGQTIKITQGPYKGHIGIVKDATEATARVELHSKCQTISVDRSRLAVV
GGPSKGNVSSYSRTPIYGSQTPMYGAGSRTPMYGSQTPQYEAGSRTPHYGSQTPLHEGNR
TPSHGGAWDPSNANTPARGNADFEDYPFEEQSPSYNPGTPGYQPETPQGGPYTPQTPGGS
ALYNSDHNYSPFQQTPSPNTYPATTPSPSAYAATPSPAGYAATPSPGGYGYSPMNQGAPA
TPGSAMDPSSVEWQTPDIEVVIRDTHGDDGLSGQTGIIRGISGGMCSVFLPQEDRTVTIQ
GEHLEPVAPKPGDKVKVILGDDREQTGVLLSVDHPDGVVKFGPNVFRLLNLTFLCKMKN
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtgaaggcagcaattattctggaagtgaaaatgaagagagtgaggctgag
caggaggacaacaagagcgaggccgggtcagaccaagaatctgatgggggcgtggcggaa
gatgaagcagaagaagtgacggaacaggaggcagctgcagaagagccagagggggaagag
gagcctgaaggggaggatctggatgaagaggatgaggaggatgaagatgacgaagatgac
gatgatgatgatgatcgtggcaaaagaaagcgcaagaagcctcgctatggaggcttcatt
ttggatgaggctgaggtggatgacgaagtggaagaagaggaagagtgggaagaaggtgca
gaggacatcattgatcgcacaagacccaatgaggaaaacacttcccgtgacattgacagt
caccgtagattgcagatgatgtggacgtctcaaaaagaggatgaaattgaagattactat
agaaggaagtatgctgaatcttctgccgctgaaaaaggatatggtgatggcggtgatcat
gaactgccagacgagatcgcacaacaaacacttttgcctggtgtcaaggatccaaacttg
tggatggtcaaatgtcgaatcggtgaagaaaaatcaacagttcttttgctcatgaggaaa
ttcattgcttatcagtatactgaagagcctttgcaaatcaaaagtgtggtggctcctgaa
ggagtgaaaggttatatttatattgaggcctacaaacaaactcatgttaaacaagccatc
gctggcgttggcaacttacgcatgggacaataccaacagatgatggtccccatcaaagag
atgacggatgtgttgcgtgtgacaaaggagcaggcccaactgaagccaaagcagtgggtt
cgactcaagagaggtctctacaaagatgatcttgcacaggtagattttgtaaacatggcc
cagaatttcgtccatctgaagttgattcctcgagtcgactacacgaagaagaggggagcc
ctgcgctcgaataatgagcaagagaagcgcaagaaaggtcgcaagccggtggccaagcta
tttgatgtggatgctatcagagctcttgggggagaagtgtctacagatggtgattacctg
atctttgaaggaaatcgttacagtcgtaaaggctttctttataagagttttgctaggtct
gcccttattgtcgatggcgtcaaacccactctttcagaattggaaaagtttgcggagaag
agcgacacgaggagcatggaaattgagttgagcgagactgctcaagacgaagccggccac
agcttcagtccgggagacaatgtggaagtctgtgagggtgagttgatccatcttcaaggc
cgagtgattgccgtggatggaaacaaagtcaccatgctgccctcccatgaagatctgaag
gaacctctggaatttccagcccatgagttgaggaaatacttcaagatgggagaccatgtg
aaggtcatctctggcacctacgaaggggacacggggctcatcgtcagagtcacagataac
ttcgtactgctcttttcggatctcaccatgcacgagctaaaagtacgtccacaagatctt
caactgtgcacagacatggccaccggagtggattccttaggacagtttcagtggggtgac
ttggtactactggacgcacaaactgtgggagtgattgttcgacttgaaaaggaaaatttc
cacatcttaaacatgcatggaaatgtagtgaaagtaaaacaccagagtgtgagtaaacgg
aaagacacaaggcgggccgtgtccttggactccgaacagaaccagattcaggtcagggac
gtggtcaaggtcattgacgggccccattcgggtcgccagggagagatcaagcatttgtac
agaagttttgccttcctccattctcgtatgatgatggaaaatggtggcgtctttgtctgc
aagacacgtcatctggtgctggctggagcgggcagtggccatgccaggcccttgaccgaa
ataaacatgaggtccccattccatgccgcgtctcctcgcctcaacagccccatgcatccc
tcgggtggtgggggcaaatcacctggtggtgctggggctggtaacctgggcctgggaggt
gcaggcaggggacgaaacaggagggacacggaactcatcggccagaccataaagatcacc
caggggccgtacaaaggacatattggcattgtgaaagatgccacagaagccacagcaaga
gtggaacttcattccaagtgtcagacaatttctgtcgacaggagtcgattggctgtcgtc
gggggcccgagcaagggcaatgtgtcgagctacagtcgaacacccatctatggaagccag
acgcccatgtatggagctggatctaggacaccaatgtacggctctcagacaccgcaatat
gaagctggcagtcgtacacctcactatggcagccagacacccctacatgaaggaaaccgc
accccaagtcatggaggagcatgggatccttccaatgctaacacccccgcaaggggcaat
gcagactttgaagattaccccttcgaagaacagtcgccatcttacaacccgggcacccct
ggataccagccagagactccccagggtggaccctatacccctcagacccctggaggttct
gccctctacaactctgaccacaactactcaccctttcaacagacgccatcacctaacaca
tatccagcaactactcctagtccatctgcttatgcagcgacaccctcccctgcaggttat
gctgccactccttctcccggtggttacggttacagtccgatgaatcaaggagcaccggcg
acacctggaagtgccatggacccctcatctgtagaatggcagacaccagacattgaagtg
gtcatcagggacactcacggtgatgacggcctaagtggacagaccggcatcatccgggga
atatcgggtgggatgtgttccgtttttcttccacaagaagatcgcacagtcaccatacaa
ggagagcacctggagcctgtagccccgaagccaggggataaggtgaaagtgatcttgggc
gacgatcgagagcagacgggagtcctgctgagcgtggatcacccggacggtgtggtgaaa
ttcggacccaacgttttcaggctgctcaacttaacattcctgtgcaaaatgaagaactga
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integrated database retrieval system
