Uloborus diversus: 129225286
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Entry
129225286 CDS
T09235
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
udv
Uloborus diversus
Pathway
udv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129225286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129225286
03019 Messenger RNA biogenesis [BR:
udv03019
]
129225286
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129225286
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129225286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C2H2_10
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
129225286
NCBI-ProteinID:
XP_054715847
LinkDB
All DBs
Position
6:120341068..120342204
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AA seq
284 aa
AA seq
DB search
MEDIVAFADNLRFDIEIALEQQLGALPLPFPGMDKSGSSICDFFVRGICSKGSSCPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPNCRLRHTRRVICANYMCGFCIDGPNCKFMHPKFDLPIQDPTAQP
KKSIITCHYCSEPGHKAISCPNMPAELRDDQNVKSNSQSNINQIQLVSIQLQDGLKAGFR
PIEQVTCFKCGEKGHYANKCPKGHLAFLSLALQNNPRPQLQQQS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaagatattgttgctttcgctgacaatttaaggtttgatatagaaattgctttagaa
cagcaattaggagcattacctttgccattccctggaatggacaaatcgggatcttctata
tgcgatttctttgttcggggtatctgcagcaaaggttcttcttgcccatttcggcatgtc
aaaggtgatagaactgttgtttgtaagcattggcttcgagggctttgcaagaaaggcgac
cagtgcgaatttttacacgagtatgatatgagcaaaatgccagaatgttatttttattct
agattcaatgcttgtagcaataaagaatgtccatttttacatatagatcctgaagctaag
atcaaagattgcccgtggtatgatcgaggattttgtaggcatggaccaaattgccggctt
cgtcatacgagaagagttatatgtgcgaactacatgtgtgggttttgcatagatggacca
aactgcaaattcatgcatccgaaattcgatttgccaattcaagaccctactgctcaaccc
aaaaaatcgattatcacttgccactattgctccgaacctggccacaaagctatttcgtgc
cctaatatgccagctgaactgcgagatgatcaaaacgttaagagtaattcacagagtaac
attaatcagattcagcttgttagtattcaattacaggatggcttaaaagcagggttcagg
cctatcgagcaagtgacttgttttaaatgtggggaaaagggtcattatgctaataaatgt
cccaaaggccatctagcattcctcagtctggcgttgcaaaataatccccggccacaactg
cagcaacaatcgtag
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