Uloborus diversus: 129225647
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Entry
129225647 CDS
T09235
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
udv
Uloborus diversus
Pathway
udv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129225647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129225647
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129225647
U7-dependent histone pre-mRNA processing factors
129225647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Myosin_N
Motif
Other DBs
NCBI-GeneID:
129225647
NCBI-ProteinID:
XP_054716090
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Position
7:complement(100517922..100592389)
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AA seq
753 aa
AA seq
DB search
MTSIIKLLPLSGVHSEDPHCYILQVDEFRFLLDCGWDETFNMTHIKELKKHIHQIDAVLL
SYPDTLHLGALPYVVGKCNLDCPIYSTIPVYKMGQMFMYDLFQSRHNTEDFDLFTLDDVD
AAFDKIIQLKYSQTISLKGKGQGISITPLPGGHMIGGTIWKIFKDGEEDIIYAVDFNHKK
ERHLNGCILESVSRPSLLITDSYNANYVQLRRRLRDEQLMTNVLQTLRNSGNVLIAVDTA
GRVLELAHMMDQLWRSQDSGLMAYSLALLNNVSYNVVEFAKSQVEWMSDKIMRSFEGARS
NPFQFKHLQLCHSLGELNKVPEPKVVLASMPGMECGFSRELFIQWSGNPRNSIILTSRSQ
PGTLGRSLIESPDQKTVELQISRRVRLEGAELEEHLRREKEKELEAARHRAEKEAELGGS
DSSEESEDEMEVDKGGNARHDLMMKIEGKPRGGGFFKQAKKSYPMFPIKEEKIKWDDYGE
IIKLEDYMILEPSTLEEENKENKVENDDAIQDITEVPTKCISFTQTLDIRASVQFIDFEG
RSDSESIKKILSLIKPRRLIIVRGPTEATESLSSYCLSGTVQGKVFTPHLLETVDATTES
HIYQVKLKDSLVSSLDFVKSKDVELAWVDGEIVMEETIDKLVVKDEEILKDENEEIKEED
EAETDRIPVLQPLPLQQITTIHPTIFINEVKLSDFKQVLMRHGINAEFSGGVLYCNDVVA
LRKNESGHIHFEGTLTEDYFKVRDLLYEQYAII
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgacttccatcatcaaattgctgccattgtctggagtgcacagtgaagatcctcactgc
tacatacttcaagtagatgagtttagatttttactagattgtggatgggatgaaacattc
aatatgacccacatcaaggaactcaaaaagcatattcatcagattgatgcagtattactg
tcttatcctgacactttacacctgggggcattaccatatgttgtaggaaagtgtaattta
gactgtcccatctattctaccattcctgtgtacaaaatgggacagatgttcatgtatgac
cttttccaatctcggcacaatacagaggattttgacttattcactctggacgatgttgat
gctgcatttgataaaataatccaactgaaatacagtcagacaatcagcttgaaaggtaaa
ggtcaaggaatatctataacacctttgcctggaggtcatatgataggtggaacaatttgg
aagatatttaaagatggagaagaagatatcatctatgctgttgatttcaaccacaaaaaa
gaaaggcatctaaatggatgcatattggagtctgttagccggccttccctacttattaca
gattcttacaacgcaaattacgttcagttaaggcgacgattgcgagatgaacaacttatg
acaaatgtgttacaaactttacgcaatagtggtaatgtgttaattgccgttgatactgct
gggagagttttagaattagcacatatgatggatcaactttggcgaagtcaagattctggg
ttgatggcttattcattggctctactcaataatgtcagttacaatgtagtggagttcgcc
aagtctcaagttgaatggatgagtgataaaattatgaggtcctttgaaggagcaagaagc
aacccattccagtttaagcacctccaattatgtcatagtttaggggagttgaacaaagtt
ccagaaccaaaagttgtgttagctagtatgccaggaatggagtgtggcttttctcgagaa
ttgtttattcagtggtcgggcaatcccagaaatagtatcatattgacctccaggagccag
cctggtacattaggaagaagtcttattgaatctcctgaccaaaaaactgtagaacttcaa
attagtaggagagttcgtttggaaggtgcagagttagaagaacatttaaggcgggaaaaa
gaaaaagaattagaagcagcccgacatcgagcggaaaaagaagcagagcttggaggctct
gattccagtgaggaaagtgaagatgaaatggaagtagacaaaggtggaaatgctaggcat
gatttaatgatgaaaattgagggtaaaccaagaggcggaggtttctttaaacaagcaaag
aagtcatatcccatgtttcccatcaaagaagaaaagataaaatgggacgactatggagaa
ataataaagctagaagactatatgattttagaaccttctacacttgaagaagaaaacaag
gaaaataaagttgaaaatgacgatgctattcaagatatcactgaagttccaacaaaatgc
atttcttttacgcagactcttgatattcgggcttctgtacaatttatagattttgaagga
cgatcagacagtgaatccatcaaaaaaatactaagccttattaaaccccgaaggctaatc
attgttcgaggcccaacagaagcaactgaatcattgtctagttattgtttatctggtact
gttcaaggaaaagtgttcacaccacatttactagaaacagttgatgcaactacagaaagt
cacatatatcaggttaaattaaaagattctttagtgagctcattagattttgttaaatca
aaagatgttgaattagcgtgggttgatggagaaatagtaatggaagaaactattgataaa
ctggtagttaaagatgaagaaatccttaaagatgaaaatgaagagataaaagaggaagat
gaagcagaaactgatagaataccagtattgcaaccacttccacttcaacagatcactaca
attcatccaacaattttcataaatgaagtaaaattatcagactttaaacaagtcctaatg
aggcatggtatcaatgctgagttttcaggtggtgtcttatattgcaatgatgtggttgca
ctcaggaaaaatgaatctggtcacattcattttgagggaacattaacagaagattacttc
aaagtcagagacttgctgtatgaacaatatgctataatttga
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