Uloborus diversus: 129226916
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Entry
129226916 CDS
T09235
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
udv
Uloborus diversus
Pathway
udv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129226916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129226916
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
129226916
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
129226916
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
129226916
NCBI-ProteinID:
XP_054717521
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Position
7:complement(142157315..142182229)
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AA seq
289 aa
AA seq
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MFDIRLSRSMPKAEPEIEDIQNLVTPGTIVSLDPGFMRGRGTWMDDDKICASVAGTIERV
NRLISVRPQRSRYIGEVGDVVVGRIVEVQHKRWMVDINARLNAVLLLSSVNLPGGEMRRK
TEEDELMMRHYLEVGDLISAEVQSVFADGSLSLHTRSLKYGKLSQGQFVKVPSSLIQRKK
THFHNIVSGIQIILSNNGYIWISPAVGEGVETGGFAQNLECVSKMDRENIARLXNCILAL
AKHNKLLSDTVILYAYEESLGYQAKELLKPEVMSSVVDLVEQRRELERN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattcggctaagtagaagcatgccaaaggcagaacctgaaattgaagatatt
cagaacttggttactcctggaactattgtttctctcgatcccggattcatgagaggtcgt
ggtacatggatggatgatgataaaatatgtgctagtgtagctggcactattgaaagagtt
aataggctaatttcggtgagacctcaaagatctaggtacattggtgaagttggagatgtg
gtagttggccgaatcgtagaggtgcaacataaacgatggatggttgatataaatgcacgt
ctcaatgctgtgttgctactatcttctgttaatttgcctggtggagaaatgagaaggaaa
acagaagaagatgaattaatgatgcgacattacttggaagttggagatctcattagtgca
gaagttcagtctgtatttgcagatggatctctttcactgcatacaagaagtttgaaatat
ggaaagttatcccagggtcagtttgtcaaagtaccttcatcactgattcaaagaaagaaa
actcattttcataatattgtcagtggcattcagattatactcagcaataatggatacata
tggatctctcctgctgttggagaaggagtagaaacaggaggctttgcccaaaacctagag
tgtgtttcaaaaatggatcgtgagaatatagcccgactcnagaattgtatattagcatta
gcaaaacataataaattactgtctgatacagtaatattgtatgcatatgaagaatccttg
ggatatcaagcaaaagaacttttaaagccagaagttatgagttctgttgttgatttggtt
gagcaaagaagagaacttgaaagaaattaa
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