Uloborus diversus: 129227039
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Entry
129227039 CDS
T09235
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
udv
Uloborus diversus
Pathway
udv03030
DNA replication
udv03420
Nucleotide excision repair
udv03430
Mismatch repair
udv03440
Homologous recombination
udv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129227039
03420 Nucleotide excision repair
129227039
03430 Mismatch repair
129227039
03440 Homologous recombination
129227039
03460 Fanconi anemia pathway
129227039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
udv03000
]
129227039
03032 DNA replication proteins [BR:
udv03032
]
129227039
03400 DNA repair and recombination proteins [BR:
udv03400
]
129227039
Transcription factors [BR:
udv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129227039
DNA replication proteins [BR:
udv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129227039
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129227039
MMR (mismatch excision repair)
129227039
DSBR (double strand breaks repair)
HR (homologous recombination)
129227039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
POT1
DUF223
Motif
Other DBs
NCBI-GeneID:
129227039
NCBI-ProteinID:
XP_054717650
LinkDB
All DBs
Position
7:30718780..30721492
Genome browser
AA seq
770 aa
AA seq
DB search
MIPKLSFGALNCILDGLVMENVILQVLGYKFVPGSNNNRFRLLLNDGQMLFPYAILATQL
NSLIENKQLEKYTIINLKKYVCSQISLEKKVIICLDIDVIALGTNVSQKISNASTSNSFN
EADIPTQAFEVSTVTNTTPVVQQSLFNGDGLNSSTSSTHGRPVAQQSIFNNDQLNSSPLR
TSEGPVVQRSIFNNEQLNSSTSSTHGRPIVRQSIFKNQFNFRPSRTSENTAVQQSICNND
QLNSCPSSSSGEPVVQRSIFNNDQLNSSTSSTHGGPVVQQSTFHNQFNSSSARTSGRPAV
QQSIYNNERLNQSALSVSNCPSYKNSSSNADSSNSFVPISNLTPYQNKWVIRARVIYKTA
SISYRHQRHEGKYFSFYLLDDSGEIRVTAFNEHASLLEKTIELDKIYHISNAQVKLSKGN
SAIKSDFELVVDQSTKIAAFDDDCATFPRLSFNFRQICDISSCSKDTVIDVIGICNAASD
VKKIVARSDNKELSKRDVELIDTSETAVTISLWGVDAENFKQENHSVIAIRNAKVSDFRG
HSISVSPFSMLFINPDIPETSELKRWFSNLNQNVMFQSISSNASLMMGNQNWKTFAQITA
NEQCYGDEAEYFSIKATIIMVAKEKCLYQACPAVDCFKKVQLIDGLFKCSKCNQIYSTFK
WTCLLSINIADFTDSHWAIAFKEIAESFIGFTAKELYAMKESNEDKYYDVLSDLHFKSYI
FNLRSKVETYNETSSLKTTILSKNNVDPLSYTKKLLGDIKRFSSILNDSE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgataccaaagctttcttttggagctttaaattgtattctcgatggacttgttatggaa
aatgtcatactacaagttttaggttacaaatttgttcctggaagtaataacaatcgcttt
cggctgttattgaatgatggccagatgctatttccatatgctattctagcaactcaactt
aattctttaattgaaaataagcaattggaaaaatatactatcataaacttaaaaaagtat
gtttgctctcaaatttctttagaaaaaaaagttattatttgcttagatattgatgtaata
gcactaggaacaaatgtttcacagaaaatttcaaatgcaagcacgtcaaacagttttaat
gaagcagatattccaactcaagcgtttgaagtgtctaccgtaacaaatacaacaccagtt
gtgcaacagtcactattcaacggcgatgggttaaactctagtacgtctagcacgcatggg
agaccagttgcgcaacagtcaattttcaacaatgatcagctgaattctagtcccttaagg
acttcagaaggaccagttgtacaacggtcaatattcaacaatgaacagttaaactctagt
acatctagcactcatggacgaccaattgtgcgacagtcaatatttaaaaatcagtttaac
tttagaccctcaagaacttctgagaacacagctgtgcaacagtcaatatgcaacaatgat
cagttgaattcttgtccctcaagctcttctggagaaccagttgtgcaacggtcaatattc
aacaatgatcagttgaactctagtacatctagcactcatggaggaccagttgtgcaacag
tcaacatttcataatcaatttaactctagcagcgcaagaacttccggaaggccagctgtg
caacagtcaatatacaataatgagcggttaaaccagagtgccttaagtgtttctaattgt
ccgagttataaaaattctagttcaaatgcagattcaagtaatagttttgtgcctatttca
aatctcacaccttatcaaaataaatgggtcataagagctcgtgtcatatataaaactgca
tctataagttacagacatcaaagacatgaagggaaatatttttctttttatctcttggac
gattctggtgaaatcagagttacagcattcaatgagcatgcgagtctacttgaaaagact
attgaacttgacaaaatataccatatttctaatgcccaagtgaaactatctaaaggtaat
tcggccataaaatctgattttgagcttgttgttgaccaaagtaccaaaattgctgctttt
gatgatgactgtgccacatttccaagattatctttcaatttccggcagatttgtgacata
tcctcatgcagtaaagatactgtaattgatgtgatcggcatttgtaacgcagcgtcagac
gtgaagaaaattgtagctcgatcggataataaagaattatctaagagagatgttgagctg
atcgatacaagtgagacagcagtgaccatttcattgtggggtgttgatgcagaaaacttc
aaacaagaaaatcattctgttatagcaataagaaatgcgaaagtttccgatttccgtggc
cattcgattagcgtttctccttttagtatgttatttataaatccagatattccagaaaca
tctgaattaaaaagatggttcagtaacttgaatcaaaatgtgatgtttcagtctatatca
tccaatgctagcttgatgatgggcaaccaaaattggaaaacatttgcacaaatcacagct
aatgagcaatgttatggtgatgaagctgaatatttttctatcaaagctactatcataatg
gttgcaaaagaaaaatgtttgtatcaagcatgcccagctgtagattgttttaaaaaagtg
caattgatagatggtttgtttaaatgttcaaaatgcaatcaaatttatagtactttcaaa
tggacatgtttattatccataaatatagcagattttacggacagccattgggcaatagcc
ttcaaagagatcgcagagtcctttataggtttcactgcaaaagaactctatgctatgaaa
gaaagtaatgaagacaaatattatgatgtactgtcagatttgcactttaaatcatacatt
tttaatttacgttcaaaagtagaaacatataatgaaactagcagtctaaaaactacaatt
ttaagcaaaaataatgttgatccgttgtcgtatactaaaaagcttttgggtgatatcaaa
cgttttagctcaatattaaatgattcagaataa
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