Uloborus diversus: 129227223
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Entry
129227223 CDS
T09235
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
udv
Uloborus diversus
Pathway
udv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129227223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
udv03041
]
129227223
Enzymes [BR:
udv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129227223
Spliceosome [BR:
udv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129227223
Complex C
U5 SnRNP specific factors
129227223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
SWI2_SNF2
AAA_19
PhoH
Motif
Other DBs
NCBI-GeneID:
129227223
NCBI-ProteinID:
XP_054717706
LinkDB
All DBs
Position
8:complement(68683409..68690151)
Genome browser
AA seq
2137 aa
AA seq
DB search
MADAAARSLQFEYKANSNLVLQADTRLIERRPRDEATGEVVSLVGKLEGSRMGDRYQRTK
PSVAEEKKAKRMKRDESRYDVSKLKGQSMLSDDIEDMVGILYRPKTAETKQTYEVLLSFI
QEALGDQPRDILCGAADEVLAVLKNEKIRDERDRRKETEALLGGLAEERYAVLVNLCKKI
SDYGGDDKVQTTEENIDETYGVNVQFEESDEEEEEICGEVKDDDSNDENEGDEAIVDSTL
HATNLGIGQDTLGKSGKGLHPRDIDAYWLQRKLSKFYDDPVVAQTRAGEVLEILKIAVDD
RDVENQLVLLLGYNQFEFIKILRQHRQMILYCSLLASLQSGAEKTKLKEKMKNDPELEKI
LRQLENTEKEDIVQEERERRAQVRQARVDADLEAMDIDGESVPQLQQCRVLDLEDISFAH
GSHFMANKRCQLPDGSFRKQRRGYEEIHVPALKPKAFDSNEALMPIEKLPKYIQPAFEGY
KSLNRIQSRLHKTALESDENLLLCAPTGAGKTNVALLCMMREIGKHINADGTINADEFKI
IYIAPMRSLVQEMVGNFSKRLSSYNIQVSELTGDHQLTREQINATQVIVCTPEKWDIVTR
KGGERTYTQLVRLMIFDEVHLLHDERGPVLEALVARTIRNIEMTQEEVRLVGLSATLPNY
EDVATFLRVTTGLFYFDNSFRPVPLEQQYIGITEKKPIKRFMLMKEILYEKVMEHAGKNQ
VLIFVHSRKETGKTAREIRDMCLEKDTLGQFLRGGSASTAVLETEANQVKNLELKDLLPY
GFAIHHAGMSRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WVELGALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLFNQQLPVESQLISKLPDM
LNAEIVLGNIQNMKEAVTWLGYTYLYIRMMRNPNLYSIPDIGMDPLLEKQRADLIYTAAT
MLDKSNLLKFDKKAGVFQVTEVGRIASHYYCTFETMTTYTQLLKQTLSEIELFRVFSLSS
EFKNLNIREEEKIELQKLMERVPIPIKESIEESSAKVNVLLQAYISQLKLEGLALMADMV
YITQSADRLMRAIFEIVLHRGWAQLTDKALSLCKMIKRRMWQSMSPLRQFRKIPDEVVKK
IEKKNFPWERLYDLGPNEIGELLRMPKLGKTVHKYVHQFPKLELSAHIQPVTRATLRVEL
TITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKSKFCQDEHIVKFFVPVFEPL
PPQYFIRIVSDQWIGSETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNPFFESLYK
DKFPYFNPIQTQVFNSVYNSDDNAFIGAPTGSGKTIIAEFAILRLLSQNAEGRCVYVTPK
EQLAEIIYADWMQKFSNSMNKKVVLLTGETGTDLKLLAKGNIIISTPEKWDVLSRRWKQR
KNVQNINLFIVDELQLIGGEDGPILEVICSRMRYISSQIEKPIRIVALSSSLANAKDVAQ
WLGASQNSTFNFPPNVRPVQLELHIQGFNITHNASRLLAMSKPVYQSIVRLSPRKPVIVF
VPSRKQSRLTAIDILTYCASEAQPARFLHCTDEDIQPFVDKITDKTLKETISNGVAYLHE
GLNASDSKIIGQLFDSGAIQVVVVSRNLCWGLSLAAHLVIIMDTQFYNGKIHTYEDYSIT
DVLQMVGRANRPTIDDDGKCVLLCQSSKKDFFMKFLYEPLPVESHLDHCLHDHFNAEIVT
KTIDNKQDAVDYLTWTFLYRRMTQNPNYYNLQGVTHRHLSDHLSELVENTLTDLQQSRCI
DIEDEMDVLPLNLGMIAAYYYINYTTIELFNMSLNNKTKVRGLLEIISSAAEYETVPIRH
REDNLLKQLASRLPHKLPNPKFSDPHVKTNLLLQAHLSRMQLSAELQSDTEDILSKAIRL
IQACVDVLSSSGWLSPALAAMELAQMVTQAMWNKDSYLKQLPHFTSEIVKRCTDMGVETV
FDVMELEDEDRNKLLQLNDSQMADVARFCNRYPNIELSYEVQAKENIISGQQVNVSVQLE
REDEMTGPVIAPLFPQRREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKLDFLAPNPGDH
TYTLYFMSDAYMGCDQEYRFNIRVNEQNRKGSVSDSD
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgctgcggctcgttcgcttcaatttgagtataaagctaattcaaatttagtt
ttacaagctgacactcgtctcattgaacgtcgaccaagagatgaagcgacaggtgaagtt
gtttctcttgttggaaagttggaaggctctcgtatgggtgataggtatcagcgaacgaag
ccatcggtagcagaagaaaagaaagctaagagaatgaaaagggacgaatcccggtatgac
gtttcaaaacttaaaggacagagtatgttatctgatgatatcgaagacatggttggcatt
ctgtaccgaccgaaaacagcagagactaagcaaacatatgaagtgctcttgagcttcatt
caagaagccctcggtgatcaacccagagacattctatgtggtgctgctgatgaagtatta
gcagtcttgaaaaatgaaaagattcgcgatgagagagatcgcagaaaagagaccgaggct
ttgttgggtggtttggcagaagagagatacgcagtgttagttaatttgtgcaagaagatt
tccgattacggtggagatgataaagtacagactacagaagagaatatcgacgaaacttat
ggtgttaatgttcagtttgaggagtctgatgaggaagaggaagaaatctgtggagaagtc
aaagatgatgattctaatgatgagaatgaaggagatgaggccatagtggacagcactttg
catgccactaatctaggaataggacaagatacattagggaaaagtggaaaaggcttgcat
ccacgagacattgatgcatattggttgcaaagaaaactgagtaaattttatgatgatcct
gtggtggcacaaaccagggcaggagaagttctagaaatcttgaaaattgcagttgatgat
cgagatgttgaaaatcagttagttttgttacttggctataaccagtttgaattcatcaag
atcttgagacaacatagacagatgattttgtattgctcattgcttgcctctttgcaaagt
ggagctgaaaaaacaaaactgaaagaaaaaatgaagaatgatccagaattggaaaagata
ttacggcaattagaaaatacagaaaaggaggatatcgttcaagaagaacgtgaacgtaga
gcccaagttcgtcaagctagagttgatgccgatttggaagcaatggatattgatggtgaa
agcgtaccacaacttcaacaatgtcgtgttttggatttagaagatatatcttttgctcat
ggcagtcattttatggcaaataagcgttgtcaactgcccgatggctcttttcgtaagcag
aggcgtggttatgaagaaattcacgtacctgccctgaaaccaaaagcttttgactcaaat
gaggctctgatgccaattgaaaagctgccaaaatatattcaacctgcatttgagggatat
aaaagtctgaaccgtattcaaagtcgactgcataaaacagcattagaaagtgatgaaaat
ctattgttatgtgcacctactggagcagggaagacaaacgttgcattattgtgtatgatg
cgcgagatcggaaagcacataaatgctgatgggacgattaatgctgatgagttcaaaatt
atctacattgcacctatgagatcgttagtacaagaaatggtgggaaacttcagtaagcgt
cttagctcttacaacatccaggtttctgaattgactggtgaccatcagttgacaagagaa
caaataaatgctacacaggttattgtgtgtactcctgaaaagtgggatattgtcacccgt
aaaggaggcgaaagaacatacacccaacttgttcgtctgatgatatttgatgaagtgcac
ttactacatgatgaacgtggtccagtgttggaagctttggttgcaagaaccatccgcaac
atagaaatgactcaagaagaagtacgattggtaggtctcagtgctactttgccaaattat
gaagatgtagctacattcttaagagtgacaactggcctattctatttcgacaacagcttt
cgacctgttcccttagaacaacaatatattggcattactgaaaagaaacccatcaagcgc
ttcatgttgatgaaagaaattctgtatgaaaaagtaatggaacatgctggaaaaaatcaa
gtacttatttttgttcattcgagaaaagaaacgggaaaaactgctcgagaaataagagat
atgtgtctagaaaaagacacgcttggacagtttcttcgtggaggatctgcttcaactgct
gtcttggagactgaagcaaaccaagtgaagaatctcgaactaaaagatctgttgccctat
ggctttgcaattcaccatgctggaatgagtcgagtggaccgaacgcttgtagaagatttg
tttgcagatcgtcacattcaagtactggtatcaactgccaccctggcttggggtgtgaat
cttccagctcatacagtcatcatcaaaggtactcaagtttatagtccagaaaaaggaaga
tgggtcgaactaggagcacttgatgttttacaaatgttgggaagagctggtaggccccaa
tatgataccaaaggtgaaggaatattgattaccaatcatagtgaactgcaatattacttg
tccttattcaatcaacagttgccagtagaaagtcaactaattagtaagcttcctgatatg
ctaaatgcagaaattgtccttgggaatatacaaaatatgaaagaagctgttacttggctg
ggctacacatatttgtatattcgtatgatgcgaaatccaaatctttacagcatccctgat
attggtatggatcctttgctggaaaagcagagagcagacttaatctatactgctgccact
atgcttgataaaagtaatttgttaaaatttgataagaaagctggagtttttcaagttact
gaagtagggagaattgcaagtcattattattgcacttttgaaactatgacaacatacact
caattgttaaaacagactctcagtgaaattgagctgttcagagtattttccctgtccagt
gagtttaagaatttgaatattcgagaagaggaaaaaattgagttgcaaaaattgatggaa
cgtgttcccatacctattaaagagagcattgaagaatcaagtgcaaaagttaatgttttg
ctgcaagcttacatttctcagttaaaattagaaggtcttgctttgatggcagacatggtg
tatatcacacagagtgctgacagattgatgcgagctatttttgaaattgttcttcataga
ggttgggctcaactaacagataaagctttgagtctttgcaaaatgatcaagagaagaatg
tggcagtctatgtctccccttcgtcagttccgtaaaattcctgatgaagtagtgaaaaag
attgaaaagaaaaactttccttgggaaaggctgtatgatttaggacccaatgaaattggt
gagctgttgagaatgccaaaactaggcaagactgttcacaaatatgtgcatcagtttccc
aaattggagctgtctgctcacattcagccagttactcgagcaacattacgagttgaactg
actattacgcccgactttcaatgggacgagaaagttcacggaagttcagaagcattttgg
attcttgttgaagatgttgacagtgaagtaattctacaccatgaatattttcttttgaag
agtaagttttgtcaagatgagcatatcgtaaaattcttcgttccagtatttgaaccgctg
ccacctcaatactttattagaattgtatctgatcaatggatcgggtctgaaacacaactc
cccgtgtcttttcgacatttaatcttgccagaaaagtaccctccaccaacagaactttta
gatcttcaaccactacctgtatctgctcttaggaatccattttttgaatctttatataaa
gataaatttccctatttcaatccaatccaaacacaagtatttaattctgtatataacagt
gatgataatgctttcattggagctccaactggaagcggcaaaaccatcatagcagagttt
gccattcttcgtttgttgtctcagaatgctgaaggtagatgtgtttatgttactcccaag
gaacagcttgctgaaataatatatgcagattggatgcaaaaattttcaaattccatgaat
aagaaagttgttttacttactggtgaaactggcacagatttgaaacttcttgccaaagga
aatatcattatcagtactcctgaaaagtgggatgttctttctcgaagatggaaacagagg
aaaaatgtccagaacataaatttgttcattgttgatgaattgcagctcattggaggagag
gatggtccaattcttgaggtcatttgctcaagaatgcgttacatatcatctcagattgaa
aagcccatcagaattgttgctttaagttcctcacttgcaaatgccaaagatgttgcacaa
tggcttggggctagtcaaaattcaaccttcaatttccctccaaatgttagaccagttcag
cttgaacttcacattcaaggtttcaatattactcataatgcatctcgacttctcgcaatg
agcaaaccagtgtatcaatctattgtacgattatctcccaggaagccagtcatagttttt
gtcccttccaggaaacaatctcgattgactgctatcgatattttgacttactgtgcttca
gaagctcaaccggctcgttttctccattgtacagatgaagatattcaaccttttgtggac
aaaataacagataaaacattaaaagagaccatcagcaatggtgtggcttatttacatgaa
ggtttaaatgcttcagattcaaaaatcataggtcagttgtttgacagtggtgctattcag
gttgtagtggtgtcaaggaatttatgctggggattatctcttgcagctcatttagtgata
attatggatacacaattctataatggaaaaattcatacttatgaagattattccatcaca
gatgtcttgcagatggttggtcgagctaatcgtcctaccatagatgatgatggaaaatgt
gtacttttatgtcaaagctcaaagaaagacttttttatgaaatttttgtatgaaccattg
cctgttgaaagtcatcttgatcattgcttgcatgatcattttaatgctgaaatagtcacc
aagaccatcgacaacaaacaagatgcagttgattatctcacatggacatttttgtatcga
agaatgacacaaaatcctaactactataatctccaaggagtgacccatcgacatttgtca
gatcatctttccgaactggtcgaaaataccttgactgacctccagcaatctcgatgcatt
gacattgaagatgaaatggacgtgttgccattaaacttgggtatgattgctgcatactat
tacataaattacaccacaatagaactcttcaacatgtctctgaataacaaaacaaaagtt
agaggtttgctagaaattattagttctgctgctgaatatgagactgtacctattagacat
agagaagataatttgttaaaacaacttgctagtaggctaccgcataaacttccaaatccc
aagttcagcgatcctcacgtgaaaacaaatttgcttctacaagcacacttgtcccgaatg
cagttgtctgcagaattgcagtctgacacagaagacatcctgagcaaagcaattaggtta
attcaagcttgtgtcgatgtcctgagttccagtggttggctctcccctgctttggctgct
atggaacttgcacagatggttactcaagctatgtggaacaaagattcctacttaaagcaa
ctgccgcattttacttctgaaatagtaaaaagatgcactgacatgggagttgaaactgtg
tttgatgtcatggagttagaggatgaagaccggaacaaactccttcaactgaatgattct
caaatggcagatgtggccagattttgcaaccgatatcccaatattgaactgagttatgaa
gtgcaggcaaaggaaaacatcattagtggtcaacaagtaaatgtaagtgtccagctggag
agagaagatgaaatgacagggcctgtgattgctcctctcttccctcaaaggcgagaagaa
ggttggtgggttgtaattggtgatcccaagagtaattccctaatatccatcaaaaggttg
actcttcaacaaaaggcaaaggtaaaactggacttccttgcaccaaatcctggagatcac
acgtacacattatatttcatgagtgatgcatacatgggttgtgatcaggaatataggttt
aacattcgggtcaatgagcaaaacaggaaaggttctgttagtgatagtgattaa
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integrated database retrieval system
