Uloborus diversus: 129228606
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Entry
129228606 CDS
T09235
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
udv
Uloborus diversus
Pathway
udv03013
Nucleocytoplasmic transport
udv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129228606
03015 mRNA surveillance pathway
129228606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
udv03019
]
129228606
Messenger RNA biogenesis [BR:
udv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129228606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129228606
NCBI-ProteinID:
XP_054719261
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Position
8:133270961..133311424
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AA seq
732 aa
AA seq
DB search
MADRHRRRRVKSDDDSEGSYSESDIEAEDANDAENSLKGTPEKDGVPKADNSEYESAEEE
EDKATDQTLEESRSKDQESLSEVVDEEGGEEGIAETDDVDGDFLNGDNPGDVSDDGEYVE
EERQQGDGEECSPASPIVEKELDFDEDRRNPQYIPKKGIFYEHDDRNNEDLKEKEEEPTR
DRKKKLWLDEGKWGHDRFREEEQFPKSRHELIETYGYDIRNEDGPPRARRRRRYGRGPTK
YERNWEDVSAYGRERFKAAPRGFPRGRRARGRFRGAPRFRGRGRRSFSDRDSDKNEAELN
GNIDEVPDNEDVPCPDEKIAESPIINSTDFPALPSKIESEPVPEPEKKTYYPKEPVDVEE
PKSVRTLTFENSNLSGRNSIEREVPPRRGKASPFNNSYDRGNRKPARGNRGSGRGEYPRR
GRGGMRHISPRFLEHKMNNLNSEMEQLNVNDTQEVCNGVPSEVHQSESVNNLETEMPNMA
LKGAGDSSGRPKRYSSLRQRSLPETNTYQTNQQTVPPPHSSYYEGYQPTMYAAPETGVPT
PSTQSQPTTTPPIMNPSAYQTFAPTPYPDSFGLRLPVTTAPPPQLFPQATVPAGQPILAP
PPCITPTPNIMNFAPPPPPTGYHQFTYQQYATPPPPPAPAPPSDIYQPGITYYYPQNQPP
SVRPTVQKRPKAAIPILPPPEREHKQSAKKDSNHTSNGNKRNFQENSDSINEVSSLRTDS
SPQLQTSVGVES
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagacatcgaagacgaagagtcaagtcagatgacgattcagaaggatcctat
tctgaatcggatattgaagctgaagatgcaaatgatgctgaaaatagtttgaaaggaaca
ccagaaaaggatggtgttcctaaggctgacaattcagagtatgaaagtgctgaagaagaa
gaagataaagcaactgatcaaacacttgaagagtctagatctaaagatcaagaatcttta
tctgaggtagttgatgaagagggtggtgaagaaggtatcgctgaaacagatgacgtagat
ggcgattttttaaatggtgataatcctggggatgtctcagatgatggagaatatgtagaa
gaagagagacaacagggtgatggagaggaatgttccccagctagtccaattgttgaaaaa
gaattagattttgatgaagatagaaggaacccacagtatattcctaagaaaggtattttc
tatgaacatgatgatagaaataatgaagatctgaaagaaaaggaagaagagcctacaagg
gaccgaaaaaagaaattatggcttgatgaaggcaaatggggtcatgatcgttttcgagaa
gaggagcagtttccaaaatctaggcatgaattaattgaaacatatggatatgatattcgt
aatgaagatggtcctcctcgtgcaagaagaaggagaagatacggaagaggaccgactaaa
tatgagaggaattgggaagatgtttcagcatatggaagagagcgcttcaaagctgcaccc
cgtggatttcccagaggtcgaagagcccgtggtcgctttaggggagctcctagatttcgt
ggtagaggtagaagatctttttccgatcgtgactctgacaaaaatgaagcagaacttaat
ggaaatattgatgaagtgcctgataatgaagatgttccatgtcctgatgaaaaaatcgca
gagtcacctattattaacagtacagattttcctgctttaccctcaaaaattgagagtgaa
cctgtgcctgagcctgaaaaaaagacttactatcctaaagaacctgttgatgtagaagaa
cctaaatctgtgaggactttaacgtttgaaaactctaatttaagcggaaggaactcaatt
gaaagggaggtgcctcctcggaggggcaaggcttcccctttcaacaatagttacgatagg
ggaaatcgtaaaccagctcgtggaaaccgtggatcaggcagaggggaatacccaaggaga
gggcgtggtggcatgcgtcacatttcccctcgtttcttggaacataaaatgaataacttg
aactctgaaatggagcagttaaatgtaaatgatacgcaagaagtgtgcaatggagtccct
tcagaggttcaccaaagtgagagtgttaataatcttgaaactgaaatgccaaacatggca
ctaaaaggtgctggtgattcatctggtcgtccaaaacgttactcatctctgcggcagcga
agcttacctgaaactaatacttaccaaacaaatcaacaaactgttcctcctcctcattct
tcatattatgaaggttatcagcccactatgtatgctgcacctgaaaccggtgttccaacg
ccaagcacacagagccaacctacaacaacccctccaattatgaatccttctgcatatcag
acatttgctcccactccatatccagacagctttggcttaagattgccagtcacaactgct
ccacctcctcaattgtttcctcaagcaactgtgcctgctggtcaaccgatccttgcacca
ccaccgtgcattactccaacccctaacatcatgaattttgcacctccccctcctcctact
ggttatcatcagtttacatatcaacagtatgcaacacctccacctcctccagcaccagct
cctccaagtgacatttatcagccaggaataacttattattatcctcaaaatcagcctcca
tcagttagaccaactgttcaaaagagaccgaaagcagctatacctatcttacctcctcca
gaacgtgagcataaacagagtgctaaaaaagacagtaatcacacaagcaatgggaataaa
agaaattttcaggaaaactctgattctattaatgaagtgtcatcattaaggactgattca
tcacctcagttacaaacatcagttggagttgagagttaa
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