Uloborus diversus: 129229195
Help
Entry
129229195 CDS
T09235
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
udv
Uloborus diversus
Pathway
udv03020
RNA polymerase
udv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129229195
09124 Replication and repair
03420 Nucleotide excision repair
129229195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
udv03021
]
129229195
03400 DNA repair and recombination proteins [BR:
udv03400
]
129229195
Enzymes [BR:
udv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129229195
Transcription machinery [BR:
udv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129229195
DNA repair and recombination proteins [BR:
udv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129229195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
129229195
NCBI-ProteinID:
XP_054719438
LinkDB
All DBs
Position
1:complement(33851337..33891222)
Genome browser
AA seq
1926 aa
AA seq
DB search
MSMIITSDSKAPLRDVKRVQFGILSPDEIRRMSVTEGSIKYPEIYESGRPKLGGLMDPRQ
GVIDKNSRCQTCAGNMATCPGHFGHVELAKPVFHVGFLKKCIKILRCVCFYCSKLLVSPN
NPKIKEIIAKSKGQPRKRLTHVYDLCKGKNICEGGDEIDAKLGPETSMHDDGTKKSGHGG
CGRYQPNIRQSGLDLTAEWKHINEDSQERKIALSAERVWEIFKHITDEECVVLGMDPKYA
RPDWMIVTVVPVPPLPVRPAVVMFGSARNQDDLTHKLSDIVKANNELIRNEQSGAAAHII
AENIKMLQFHVATLVDNELPGLPKAMQKSGRPLKSVKQRLKSKEGRIRGNLMGKRVDFSA
RTVITPDPNLRIDEVGVPRSIAQNLTFPEIVTPFNIEKMHELVRRGNNQYPGAKYIVRDS
GERIDLRFHPKASDLHLQCGYRVERHIRNGDVIVFNRQPTLHKMSMMGHRIRILPWSTFR
MNLSVTTPYNADFDGDEMNLHVPQSLETRAEIQELALVPRNIITPQSNKPVMGIVQDTLT
AVRKMTKRDVFLEKDQMMTLLMFLPIWDGKVPMPAVLKPKPLWTGKQLFSLIIPGNVNLI
RTHSTHPDEEDDGPYKWISPGDTKVLIEHGELISGIVCKKTVGASSGSLMHVIFSELGHE
VAGCFYGHIQTVVNNWLLLEGHSIGIGDTIADPQTYVDIQNTIKKAKLDVIEVIEKAHND
DLEPTPGNTLRQTFENQVNRILNDARDKTGASAQKSLSEFNNFKAMVVSGAKGSKINISQ
VIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGG
REGLIDTAVKTAETGYIQRRLIKAMESVMATYDGTVRNSTGQVIQFRYGEDGLEGTTVEF
QSLPTLKPSEKAFERRFRFDATNERYLRRIFLEEVVREISGSTTALSEFEKEWEVLKAER
EVLRTIFPTGDSKVVLPCNLQRMIWNAQKIFHVRTRSPTDLNPMRVIQGVDNLVKKLVIV
PGEDRLSVQANDNATILFRALLHSTLCTKRVAEEFRLSTEAFDWLLGEIETRFHQAQVQP
GEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVFL
TGAAARDAEKAKDVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQDFVNVYYEMPDFD
PSRISPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMN
NDDKLQEEEEQVDKMEDDVFLRCIEANMLSDMTLQGIEAIIKVYMHLPTTDNKKRIVITE
TGEFKPIAEWLLETDGTSLMRVLSEKDVDPVRTYSNDICEIFAVMGIEAVRKAVEKEMNH
VISFDGSYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDILLDAAS
HAELDPLKGVSENIIMGQLPRMGTGAFDLLLDAEKCKYGIEIPMVGAMGGPGVFFGSVAS
PTSGMSPQMTPWNQGGTPAYANAWSPGLGSGMTPGAAGFSPSAASDASGYSPGYSPAWSP
QPGSPASPASPYIPSPAGALSPSYSPSSPSFAPTSPSLTPQSPSYSPTSPSYSPTSPSYS
PTSPNYSPTSPSYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SCSPTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPRYSPTSPSYSP
TSPSYSPTSPSYSPSSPSYSPQSPSYSPGSPNYSVTSPKYSPTSPSYSPTSPSYSPGSPQ
YTPTSPKYSPTSPTYSPTSPSYSPSSPKYSPSSPQYSPTSPSYTPTSPKYSPPSPQYSPS
SPKYSPTSPSYSPTSPQYSPTSPTYSVTSPKGSTYSPTSPGYSPSSPSYSPASPGDDDDD
DDDIHK
NT seq
5781 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgataataacatcagactcgaaagctcccttgcgggatgtaaagagagtgcag
tttggaattctaagtccagatgaaatccgaaggatgtctgttactgaaggtagcattaaa
tatcctgaaatttatgaaagtggacgtcctaagcttggtggcctcatggatcctcggcaa
ggagttattgataagaattcaagatgccagacctgtgctggaaatatggcaacttgtcct
ggacattttggtcacgtagaacttgctaaacccgttttccatgttggattcttaaagaaa
tgtatcaaaattttaagatgtgtatgcttctattgttcaaagctacttgtgtcgccaaat
aatccaaaaatcaaagaaatcattgcaaaatccaaaggccaacccagaaaacgtctgact
catgtctatgatttgtgcaaaggaaaaaacatttgtgaaggaggtgatgaaatcgatgcc
aagcttggtccagaaactagtatgcatgatgatggcaccaaaaaatctggtcatggtggt
tgtggcagatatcaacctaatattcgacagagtggtttagatttaacagctgagtggaaa
cacataaatgaagattcacaagaaagaaagattgctctaagtgctgaaagagtatgggaa
atttttaaacacataactgatgaagaatgcgtagttcttggcatggaccctaagtatgca
agaccagattggatgattgttactgtcgtgccagtcccccctttgcctgtgagaccagca
gtagttatgtttggctctgcaaggaaccaggatgatcttacacataaactctctgatata
gttaaagctaacaatgaactgattcgtaatgagcaaagtggtgctgctgctcatattatc
gctgaaaatatcaaaatgttacagttccatgtagccacattagtagacaatgaattgcct
ggtttaccaaaggcaatgcagaaaagtgggagacctttaaaatcagttaaacaaagactg
aaaagtaaggaagggagaattcgaggtaatttaatgggaaaacgagtagatttttctgct
cgaactgttattacgcctgatcctaatttacgtattgatgaagtaggtgttccaagatct
attgcccaaaacttaacttttccagaaattgttactccatttaatattgaaaaaatgcat
gaactggttcgtagaggtaacaatcaataccctggagccaaatatattgtccgtgatagt
ggtgaaagaattgacttaagatttcacccgaaagcaagtgacttgcacttacaatgtggt
tatcgagtggagcgccatataagaaatggtgatgttattgtgtttaatcgccaacctact
ttgcacaaaatgtcaatgatgggacatcgcattagaatattgccatggtcaacctttaga
atgaatttaagtgtgacaaccccatacaatgcagattttgatggtgatgaaatgaatctt
catgtaccacaatctcttgaaactagagctgaaatacaagagttggcacttgtacctaga
aatattattactcctcagtctaataaacctgtcatgggtattgtgcaggatactcttaca
gctgtgagaaaaatgaccaagagagatgtcttcttggaaaaggatcagatgatgactctc
cttatgtttcttcccatttgggatggtaaagttccaatgcctgcagtcttaaaaccaaaa
cctctttggactggcaagcagttattttctttgattatccctggaaatgtaaatctaatt
cgtacacatagcacacatcctgatgaagaagatgatggcccatacaaatggatttctcca
ggagatacaaaagttttgattgagcatggtgagttaattagtggtattgtatgcaaaaaa
acggttggtgcttctagtggatctctaatgcatgttattttttctgaattgggacatgaa
gttgctggttgtttttatggacatattcaaacagtagtcaataactggcttttattggag
ggtcattccattggtattggagatactattgctgatcctcagacatatgttgatatccaa
aatactattaagaaagcaaagttagatgtgattgaagttattgagaaagctcataatgat
gatcttgaaccaactcctggcaatacattgagacaaacatttgaaaatcaagtcaatcgt
atccttaatgatgctcgtgataaaactggtgccagtgcacaaaagtcattgtctgaattt
aacaactttaaagctatggtagtctcaggtgcaaaaggatctaaaattaatatatctcag
gttattgcctgtgttggtcaacaaaacgttgaaggtaaacgaataccatttggttttcgt
aaacgcactttgcctcattttatcaaagatgattatggtcctgaaagcagaggctttgtg
gaaaattcataccttgccggattgactccatctgagttctttttccatgctatgggtggc
cgagaaggtctcattgatacagctgtaaaaactgctgaaacaggttatattcagcgacga
ttgataaaagctatggaaagtgtaatggccacatatgatggtactgttagaaatagtact
ggtcaagttattcaattccgttatggtgaagatggtttggaaggtacaactgttgaattt
cagtcgcttcctaccttgaaaccgtctgagaaagctttcgaaaggcggttcagattcgat
gctacaaatgaacgttatttgagaagaatattcttggaggaagttgttagagaaatttct
ggaagtacaactgcactgagtgaatttgaaaaggaatgggaggttcttaaagcagaaaga
gaggttttacggacaatatttcccactggagatagcaaagttgtgctcccttgcaattta
cagagaatgatttggaatgcacagaaaattttccatgttcgaacacgatctcccacggac
ttaaatcccatgcgggtcattcaaggagttgataaccttgttaaaaagcttgtgattgtg
cccggtgaagacagattaagcgtacaggcaaatgacaatgcaacaatattgtttagagca
ctactacattcaacattatgcacaaaacgagttgctgaagaatttcgcctctctactgaa
gcttttgattggctcctaggtgaaattgaaacacgttttcatcaagctcaagttcaacct
ggtgagatggttggagctcttgctgctcagtccctaggtgagcctgcaacacagatgaca
ctgaacacttttcattatgctggagtatctgctaaaaatgtcacccttggtgtaccaaga
cttaaagaaattatcaatatctctaaaaagccaaagactccttccttgacagtattcctt
actggagctgctgcaagagatgctgaaaaggctaaagatgtcctctgtcgtttagaacat
actacattacgtaaagtcactgcaaatactgctatatattatgaccctgatcctcaaaat
actgttattgctgaagatcaagattttgtcaatgtctactatgaaatgcctgattttgat
ccatcccgtatctcaccctggttgcttcgaattgagcttgatcgaaaaagaatgactgat
aagaaactaacaatggaacaaatagctgaaaagattaatgctggatttggagatgattta
aattgcatatttaatgatgataatgcagaaaaattggttttaagaataagaataatgaac
aacgatgataaacttcaagaggaagaagaacaagtggataaaatggaagatgatgtgttc
ctaagatgtatagaagcaaatatgttgagtgatatgactttgcaaggtattgaagcaatt
attaaagtgtacatgcatttacctacgactgacaacaagaaaagaattgtcattactgaa
actggagaatttaaacctatagctgaatggctattagaaactgatggtactagcttaatg
agagttttaagtgaaaaagatgttgatccagttcgaacatactccaacgatatctgtgaa
atctttgctgtcatgggcatcgaagctgttcgaaaagcagttgagaaagaaatgaatcat
gtcatttcctttgacggttcctatgtaaattatcggcatcttgctctgctttgtgatgtt
atgactgcaaaaggacatttgatggccatcacacgtcacggcattaatcgtcaagatact
ggagctttaatgagatgttcatttgaagaaactgtagacattttgcttgatgctgcttcc
catgctgaacttgatcctttgaagggggtgtctgaaaatattattatgggacaacttccc
cgaatgggaactggagcttttgatttacttttagatgccgaaaaatgtaaatatggtatt
gaaatacccatggttggtgcaatgggtggaccaggtgtattttttggaagtgttgccagt
cctactagtggtatgtctccacaaatgacaccatggaaccaaggaggtactcctgcatat
gctaatgcttggtctcctggcttaggtagtggaatgactcctggagctgcaggtttctca
ccatctgctgctagtgatgctagtggatatagtcctggctatagcccagcttggtcccca
caaccgggatcacccgcgtctcctgcatcaccttatattccaagtcctgctggtgctctt
tcaccaagctactctccatcttcgccatcatttgctcctacttctccatctttaactcca
caaagtcccagttattctccaacctctccatcatattctccgacaagccccagttattca
ccaacttctccaaattacagccctacaagtccaagctactctcctacaagtccaagttat
tcgccaactagccctagctattctccagcaagtcctagctattcaccaacaagtccaagc
tactcaccaacaagtcctagctattctcctactagcccaagttattctccaacgagccct
agttgctctccaaccagtccaagctatagtcctactagccctagctatagtcctacaagt
ccaagttattctccgagttctcctaactatacaccagcatctccttcttattccccgaca
agtccaagctactctccgacaagtcctcgatattcacccacaagcccaagttattctcca
acatctccatcgtacagtcctactagccccagctattcaccaagctcgcctagttactct
ccgcagagtccaagttacagccctggaagcccaaattattctgtgacaagcccaaaatac
tctcccacttcaccatcttacagtccaaccagtccaagttattctcctggatctccacag
tatacaccaacctcaccaaaatacagtcccacttctcctacttattcgccaacctctcct
tcctattcaccttcaagtccaaaatattctccttcaagtccgcagtactccccaacaagt
ccttcttatactcctacttctccaaagtatagcccaccttcaccacaatatagcccatct
tcacctaaatattcaccaacgtctccatcatattctcctacttctccacagtacagtcca
accagcccaacatattctgttaccagcccaaaaggctcgacatattcaccaacaagtcct
ggttattctccttcatctccatcttatagtcctgcaagtccaggtgatgacgacgacgat
gatgatgatattcacaaataa
DBGET
integrated database retrieval system
