Uloborus diversus: 129229654
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Entry
129229654 CDS
T09235
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
udv
Uloborus diversus
Pathway
udv04382
Cornified envelope formation
udv04512
ECM-receptor interaction
udv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129229654
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129229654
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129229654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
udv04147
]
129229654
00536 Glycosaminoglycan binding proteins [BR:
udv00536
]
129229654
Exosome [BR:
udv04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129229654
Glycosaminoglycan binding proteins [BR:
udv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129229654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129229654
NCBI-ProteinID:
XP_054719987
LinkDB
All DBs
Position
9:76583831..76712623
Genome browser
AA seq
1759 aa
AA seq
DB search
MIWRWIIVFCLLQWFYLECSEAAACKGCVVQPCICVGEKGPPGPIGITGLQGPPGTPGLM
GPEGRPGVKGLRGDLGYPGADGPRGLRGQDGMPGFEGAPGLPGAPGGDGPIGEPGYPGCN
GTDGRPGPPGIPGRQGLPGRDGIPGRIGEKGDPGEGGVNSLGIRGDPGEPGRPGYPGPPG
YRGVPGERGMTGEPGLPGYRGIPGDVGPKGPEGVGIRGPRGQKGETGNIGERGKPGDDAS
VQPPPEDVTPGPPGPPGNPGDRGEEGPRGEDGRDGLEGPKGEKGPDGDKGERGDPGPRGK
RGKTGLHGDAGEKGQKGNPGLTGVDGRPGLKGPPGDRGLTGPSGPQGIEGLPGEIIEYGK
PIPGPAGPQGLSGDRGLPGIPGKQGIPGAVGFRGPSGLPGKSGIPGEPGGLGESFKGEPG
EDGITGRPGRPGSPGFPGLQGIPGAKGEDGLVVVGPPGQSGRPGSDGNPGLPGSRGDPGR
VGDKGIAGYGRRIKGPPGPPGIPGATGLPGDVGLPGREGAIGPKGFRGDDCGYCSPGLPG
PRGDRGDEGRRGQTGPDGYQGYRGSPGKAGPPGLPGLPGYKGAPGLRGVDGVDGLPGQPG
DAGDLIFPDGRKGVRGLPGDAGYPGVPGLEGLPGAPGEDGFPGFPGRKGEQGDVGDPGYP
GLNGPPGPIGPPGLKGIPGDTSYSFIGRKGEKGFAGRPGTPGRKGSRGVPGDAFNLGNYT
QAKGYIGPPGERGDDGIPGLRGAPGFPGRNGEPGYPGPDGVKGEPGHPGPTVRGETGLKG
YFGIRGDPGYNGLPGPKGSRGFDGLPGLPGNKGEPGDVGLDGFGGPPGFPGLPGAKGERG
SFGFAGRKGVEGEIGSPGGQGIKGLPGLPGEYGFPGLKGEPGDAGPGTIGSKGFRGPSGL
PGLPGEKGNQGVDGFPGIPGGKGQRGDDGLPGLRGETGAPGLPGSQGRPGKDGQYGLPGP
KGEIGDEGFPGLSGLPGLPGKRGLPGLKGLAGDVGNRGLPGLPGLSGFPGERGDPGYSGL
PGEKGESAISGEKGDQGEPGLPGPKGFSGLAGQPGVAGPKGQPGKPGFVFPGPPAPPGPK
GAQGYPGPRGPPGAKGSSGTPGRPGFQGLKGDSGLPGPPGVAGPKGLPGVPGPKGEPGAT
GFIGFKGLKGERGPEGFVGLPGPKGDIGFAGLTGIAGLPGLKGTRGLPGVKGLPSLEVNR
GIPGEPGFSGLPGFPGPKGDRGFNGLPGLKGERGEQGFPGRIGQPGLSGIKGLPGRPGSP
GLEGLPGGSGPKGETGDEGFPGLSGRSGPPGKKGEPGIPGNDGYPGRKGERGSSFPGRAG
EKGFRGPPGPPGIGGLEGAKGFQGEVGFPGLTGLPGDRGLPGVATPGPIGEEGPPGVDGA
PGVPGEKGDSGYPGRPGFPGAKGEIGNRGFPGLPGPIGPKGFDGLTGLPGDSFGPLEVVK
LPGFPGDPGFPGFAGLPGLPGPVGEPGIPGFPGPKGDPGYPGLNGFSGPQGFKGALGDKG
LNGFAGFPGLKGSPGSPGEPGYPGSPAPSRGFFYTRHSQTEDIPRCPGGTALMWSGYSLL
YIQGNERAHGQDLGSPGSCLRKFSTMPFMFCNLNNVCHLASRSDFSYWLSTPAQMPMDMA
PITGRNIKRFVSRCSVCESSTQVIAVHSQSTEIPECPGGWDDLWSGYSFFMNTDAGAEGS
GQPLSSPGSCLEDFRPNPFIECQGLGRCNYYTTAYSFWLAVIHHEKQFLIPEPQTLKAGD
LKSKVSRCKVCRRIPPYGS
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgatttggagatggattattgtcttttgtttgttgcagtggttttacctggaatgttcc
gaagctgccgcttgtaaagggtgtgtagttcaaccatgcatctgtgtaggagaaaaagga
cctccaggtcctataggaatcacgggtctgcaaggtccaccaggaacacctggacttatg
ggaccagaaggccggcctggagtcaaaggactaagaggagacctaggttatcctggagct
gacggacctagaggactacgaggacaagatgggatgcctgggtttgaaggtgcacctggt
cttccgggtgctccaggaggagatggacccataggagaacctggttacccaggatgcaat
ggaactgatggtagaccaggacctccaggaataccaggtagacaaggacttcctggtcgc
gacggcattccaggacgaattggagaaaagggggatccaggagaaggaggcgtgaactct
ctaggaattagaggagatccaggagaaccagggcgaccaggatatccgggtccaccaggc
tatcgtggagtaccaggagaacgtggaatgacgggagaaccaggacttccgggttacaga
ggcataccaggcgatgtcggccccaaaggtcctgaaggagttggaatccgtggtccacga
gggcaaaaaggagaaacaggaaatattggggaaagggggaaaccaggcgacgacgcttcc
gtgcagccaccaccggaagatgtaactccaggaccaccagggccacctggaaatccaggt
gatagaggtgaggaagggccacgcggtgaagatggaagagacggactggaaggtcctaaa
ggagaaaaaggacctgacggtgataaaggcgaaagaggtgacccaggaccaagaggcaaa
agaggcaaaactggattgcatggcgatgcaggagaaaaggggcagaagggaaatccagga
ctgacgggtgtagatggaagaccaggacttaaaggcccgcccggggacagaggcttaacc
ggaccatctggcccacaaggaatagaaggtcttccaggtgaaataatagagtatggaaaa
cctatcccaggtcctgctggacctcagggtctatcaggagacagagggcttcctggaatt
cccgggaaacaaggtataccaggggccgttggttttagaggaccgtctggtttaccagga
aaatccggaataccaggagaaccaggaggattaggtgaaagctttaaaggggagccagga
gaagatggtataactggacgtcctggtaggcctggatctcccggatttcctggattgcaa
ggaatacctggtgctaaaggagaagatggacttgtcgttgtaggaccaccagggcagtct
ggaaggcctggaagtgatggcaaccccggattgcctgggtctagaggagatcctggaaga
gttggagacaagggtatagctggatatggtcgcagaatcaagggaccacctgggccacca
ggaataccaggcgcaactgggctgcctggagatgtcggattacctggaagagagggtgct
atagggcccaaaggattccgaggagacgattgtggttactgctctccaggacttccaggt
cctagaggtgacagaggcgacgagggcagaagaggtcaaactggaccagatggttaccaa
ggttaccgtggctcacctggtaaggctgggcctccaggactacctggtcttcctggctac
aaaggcgctccaggtctgagaggtgtggatggagtcgatggtttgccaggacaacctggc
gacgctggagatttaattttcccggatggcagaaagggagtcagaggtcttccaggcgat
gcgggctatccaggagttccaggacttgaaggattacccggtgctccaggagaggacgga
tttccaggatttccaggacgtaaaggagaacagggagacgtgggtgacccaggatatcca
ggactcaacggaccaccaggacctatcggacctcctggattaaaagggattccaggagat
acttcgtactcttttataggaaggaaaggagaaaagggatttgctggaagacctggaaca
ccaggacgtaaaggatctagaggtgttcccggtgatgcgtttaacttaggcaactacact
caagcaaaaggatacattggcccacctggagaaagaggagatgatggaatccctggtttg
agaggagctccaggatttcctgggcgcaatggtgaaccgggttatccaggtccggatgga
gtgaagggagaacctggacatccaggtcctactgttcgaggagagacaggattgaaaggc
tattttggaatacgcggtgacccagggtacaatggacttccaggaccaaagggatcacga
ggatttgatggtcttccaggattgcccggaaacaaaggtgaacctggagacgttggattg
gatggctttggcggacctcctggatttccaggactgccaggtgctaagggcgaaagagga
agttttgggtttgcaggaagaaaaggagttgaaggggaaataggttcacctggaggtcaa
ggcataaaaggtttgcccggtcttcctggagaatatggttttcctgggcttaaaggagag
ccgggagatgctggtccaggaacaataggatctaaaggatttcgaggaccatctggactt
ccaggtttgccaggagagaaaggaaatcaaggagttgatggttttcccgggattcctgga
ggtaaaggtcagaggggagatgatggcttaccaggacttcgtggggaaacaggtgcaccc
ggccttccagggtcacaaggaagacctggtaaagatggacagtatggactaccaggacct
aagggcgaaatcggtgacgaaggatttcctggactcagtggactaccgggattaccagga
aaacgaggacttccaggtttgaaaggacttgctggagacgttgggaatcgaggcttaccc
ggattacctggactttccggatttcctggtgaaagaggagatcctggatattctggtctt
ccaggagaaaagggagaatccgcaatcagtggtgaaaaaggagatcaaggagaaccagga
ttaccaggccctaaaggtttttccggattggctggtcaaccaggcgtagctggtcctaaa
ggacaaccaggtaaaccaggatttgtattcccaggtccacctgcgccaccaggacctaaa
ggagcacaaggatatcctggtcctcgaggtccacctggagcgaaaggcagctctggaact
ccaggacgacctggtttccagggactgaaaggtgattctggacttcccggacctcctggt
gtcgcaggtcctaaaggactgccgggcgttccaggtccaaaaggagaacctggtgcaaca
ggatttattggattcaaaggacttaaaggcgaaagaggtccagaaggttttgtcgggttg
ccgggtccaaaaggggacataggatttgctggtcttacaggaattgccggattgcctggc
ttaaaaggaacaagaggactgccaggagtgaaaggtctcccttccttggaagtaaataga
ggtatccctggggagccgggtttttcgggacttcccggatttcctgggcccaaaggagac
cgcggctttaacggtttaccaggactgaaaggcgaaagaggcgaacaaggtttcccagga
aggatcggacagccaggattatctggaattaaaggtttacctggtagacccggttctccg
gggcttgaaggccttcctggtggttcaggtccaaagggtgaaactggcgacgagggattt
ccaggactgtccggaagatcaggaccacccggaaagaaaggagaaccaggaatacccgga
aatgatggatatcccggaagaaaaggagaacgaggtagttcattccctggaagagcggga
gaaaaaggatttcgaggacccccaggaccaccaggcattggaggattagaaggtgcaaaa
ggatttcaaggagaagttgggttccctggattgactggacttcctggagacagagggttg
cctggtgtagcaactccaggaccaattggagaagaagggccacctggtgttgatggagcg
ccgggtgtaccaggagagaaaggtgacagcggatatccaggacgacctggattccctggg
gcaaaaggagaaatcggaaacaggggctttccgggacttccaggtcctattggacctaaa
gggttcgacggtttaacgggacttcccggtgattcatttggacctcttgaagtagtaaaa
cttcctggatttccaggagatccaggctttcccggattcgcaggacttcctggactacct
gggcctgtaggtgaaccaggaataccaggttttcctggaccaaaaggcgatcccggatat
ccgggattaaacggtttttctggacctcaaggtttcaagggtgctctcggagataagggc
ctgaatggttttgccggctttcctggactcaaaggctctcccggatcccccggagaacct
ggatatccaggatcccctgctccatcgagaggatttttctacactcgacatagtcaaact
gaagatataccccgatgccctggtggtactgcccttatgtggagtggatattccttgctc
tatatccaaggaaacgaaagagctcatgggcaggatttgggaagcccaggaagttgcctg
agaaagttcagcactatgccattcatgttctgcaatctgaacaatgtgtgccatttggca
tctcgcagtgatttcagctactggctcagcacaccagcgcaaatgccaatggatatggca
cccatcacgggtcgcaacattaagaggtttgtcagcaggtgttccgtatgtgaatcttct
acacaggtgatagctgtgcatagtcaaagtacagaaataccagaatgtccaggaggatgg
gacgacttatggtctggatatagcttctttatgaacacagatgcaggcgcagaaggcagt
ggccagcctctttcttcacctggttcttgtctggaagactttagaccaaaccccttcata
gaatgtcaaggtttaggtcgatgtaattattacaccaccgcatacagcttctggttggca
gtgattcatcacgaaaaacagttcctcattccagagcctcagacgctaaaagctggagac
ttgaaatcaaaggtttcgagatgcaaagtctgcagacgtattcctccatatggctcttag
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