Uloborus diversus: 129230723
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Entry
129230723 CDS
T09235
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
udv
Uloborus diversus
Pathway
udv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129230723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
udv03041
]
129230723
03009 Ribosome biogenesis [BR:
udv03009
]
129230723
Enzymes [BR:
udv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129230723
Spliceosome [BR:
udv03041
]
Complex A
U2 snRNP components
U2 related factors
129230723
Complex B
129230723
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129230723
Ribosome biogenesis [BR:
udv03009
]
Eukaryotic type
90S particles
Helicases
129230723
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Cas3-like_C_2
PhoH
Flavi_DEAD
nSTAND_NTPase5
ABC_tran
AAA_30
T2SSE
Motif
Other DBs
NCBI-GeneID:
129230723
NCBI-ProteinID:
XP_054721118
LinkDB
All DBs
Position
9:complement(90714352..90765306)
Genome browser
AA seq
769 aa
AA seq
DB search
MSRKKTRIDLEDTHVVRKDYDASVKNKRNDIDDFKRKSKEFDDSSPKRTRVENNGDDVER
KKDKENFNNLPYLETAIVPAASTGTVKSINQFNGLPHTAHYYELFKKRITLPVWEYKPKF
FDMLKKNQIMVLVGETGSGKTTQIPQWCVEFLRESGIRRGVACTQPRRVAAMSVAARVAE
EMDVMLGQEVGYSIRFEDCSSMKTILKYMTDGMLLREAMSDPLLEAYGVVLLDEAHERTL
ATDILMGVLKQVVSRRADMKIVVMSATLDAGKFQNYFDNAPLMTVPGRTHPVEIFYTPEP
ERDYLEAAIRTVIQIHMCEETEGDILLFLTGQEEIEEACKRIKRELDNLGPDVGDLKCIP
LYSTLPPNLQQKIFEAPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY
NPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDQTYPEILRSNL
GTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLQSLNDEGDITDLGAVMAEFPL
DPQLAKMLISSCDYNCSNEILSITAMLSVPQCFVRPNEAKKAADDAKMRFAHIDGDHLTL
LNVYHAFKQNHEDPQWCYDNFVNYRSLKSADNVRQQLSRIMDRFSLKRTSTEFSSKDYYI
NIRKALVAGFFMQVAHLERTGHYLTIKDNQVVQLHPSTCLDHKPEWVVYNEFVLTTKNYI
RTVTDIKPEWLLKIAHNYYDITNFPACEAKRQLEFLANKMQSRQYQEGF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcaagaaaacaagaattgatctggaagatacccatgttgtcagaaaggactat
gatgcttcagttaagaataaaaggaatgacatagatgattttaaaagaaaatccaaggag
tttgatgattcatctcctaaaagaacaagagtggagaataatggagatgacgtggaaaga
aaaaaagacaaagaaaatttcaacaatcttccatatctagaaactgcaatagttccagct
gcttccacaggaactgttaaatcaatcaaccagtttaatggtttgcctcacactgcacac
tattatgagctcttcaagaaaaggataactttgcctgtatgggaatataagccaaaattc
tttgatatgttgaaaaagaatcaaattatggtacttgttggtgaaactggttctggaaag
actacacaaattcctcagtggtgtgtagaatttttgagagaaagtggtattagaagaggt
gtagcctgtactcaacccagaagagtggctgcaatgagtgtagctgctcgtgtagcagag
gaaatggatgtcatgcttggacaagaagttggctacagcattcgttttgaagactgttct
tctatgaaaacaatcctaaaatacatgacagatggtatgttgctgagagaagcaatgagt
gaccctctgctggaagcatatggagttgtactacttgatgaagcccatgagcgtactctt
gccacagatatactcatgggcgttttaaagcaagtagtttccagaagagctgacatgaaa
attgttgttatgagtgccacccttgatgctggaaaatttcaaaattattttgataatgct
cctttaatgactgttcctggaagaacccatccagttgaaattttctacacgccagagcct
gaaagggattatttagaagctgctattagaacagttattcaaattcatatgtgtgaagaa
acagagggagatatattattatttttaactggtcaagaggaaattgaagaagcttgcaaa
agaataaaaagagagcttgataaccttggtcctgatgttggtgacttgaagtgtattcca
ttgtattcaacattaccaccaaatcttcagcagaaaatttttgaggctccacccccaaat
aagccaaatggtgcaattggtagaaaagttgttgtttcaacaaatattgctgaaacatct
ctgaccatagatggtgttgtttttgtcatagatcccggttttgcaaaacaaaaggtatat
aatccaagaatcagggtggaatctttattggtatcgcccataagtaaagctagtgctcaa
caacgagctggccgtgctggtagaactcgtcctggaaaatgcttcaggttatatactgaa
aaagcatacaaaacagaaatgcaggatcaaacatacccggaaatattacgctcaaatctt
gggactgttgttttgcagttgaaaaaacttggcattgatgatttagttcactttgatttc
atggatccacctgctcctgaaacattgatgagagctttagaattgctaaactatttacaa
agtttaaatgacgaaggtgatatcacagatcttggagcagttatggcagaatttcccttg
gatccacaactagctaaaatgctcatttcgtcatgtgattataactgttctaatgagatt
ttgtctataactgccatgttatcagttccacagtgctttgtgagaccaaatgaagccaag
aaagctgcagatgatgctaagatgagatttgcgcacattgatggagatcacttgacgcta
ctcaatgtataccatgccttcaagcaaaaccatgaagatcctcaatggtgctatgataac
tttgtcaactaccgttctcttaaaagtgcggataatgtaagacaacaattgtccagaatc
atggatagattcagcttgaaaaggacttcaactgaatttagcagcaaagattattatata
aatataagaaaagctttagtagctggtttcttcatgcaggttgctcatttggaacgaacc
ggtcattatttaactattaaagataatcaagtagtgcaacttcatccctccacatgccta
gatcataaaccagagtgggttgtctacaatgagtttgtgttaacaaccaaaaattacatc
agaactgtgacagacattaagccagaatggttactcaaaattgctcataattattatgac
atcactaactttcctgcctgtgaagcaaagagacaacttgaatttcttgcgaacaaaatg
caatctcgtcagtaccaagaaggattttaa
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