Uloborus diversus: 129231807
Help
Entry
129231807 CDS
T09235
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
udv
Uloborus diversus
Pathway
udv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129231807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
udv00536
]
129231807
Glycosaminoglycan binding proteins [BR:
udv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129231807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
FnI_RECK
TILa
Motif
Other DBs
NCBI-GeneID:
129231807
NCBI-ProteinID:
XP_054722158
LinkDB
All DBs
Position
10:complement(19583951..19723669)
Genome browser
AA seq
1480 aa
AA seq
DB search
MRTLRGSLWPLLALLVLTNAQDYNEGNDDTTSCESNGERYENGEEWSPDTCTSCSCVLGN
IICETEECPTIECKTQKYIPLGKCCPICVDDDEVLSPEQTVLPQEPDAPAEIPRGAVEPN
YPLVPIPGPRGTSGEPGTPGYPGERGEVGEPGSHGVPGRPGPPGPPGDLSAWFQGLALQQ
GLGGEKGPPPDAFQFMQAQVGPVGPRGSPGPPGPSGPQGFQGARGETGEPGPPGAPGLPG
ERGLPGLPGKDGEPGEDGRPGPAGPPGPPGPRGLPGMPGLPGIKGHRGFPGLDGAKGEQG
LQGEKGMQGPAGKMGTTGPLGAPGPRGERGREGPTGPPGIRGIDGLPGPPGPPGPIGRPG
PPGFPGSPGAKGDAGPVGPKGSQGLQGPRGESGKPGVSGEPGPMGPSGKDGSPGEKGSTG
ESGLAGPPGFPGARGPPGLSGSPGLPGPKGSPGIPGESGLKGETGRKGEQGGPGPRGLPG
TPGQPGKRGKSGSPGPSGPHGPPGERGVAGARGLPGPDGPAGMKGAQGDKGPQGPQGPKG
SQGESGRPGPPGLQGLRGLAGRPGLPGKDGIAGERGQPGADGKPGEPGPQGIQGLPGLMG
LPGAKGDQGEAGQDGLPGPTGPPGPRGDSGKEGTPGPLGPPGPPGESGERGPPGPQGSTG
FQGLPGNDGSPGQRGKDGEPGLPGAAGPPGPPGERGERGFPGDRGLPGSQGMPGPRGETG
PAGQDGVRGPPGEKGARGHSGPSGLLGLPGSRGEPGPRGAKGDRGDAGSPGAEGPQGRPG
DQGPQGLVGAVGPPGEAGEKGETGPPGPDGQLGSPGVPGDRGAPGPPGQQGFPGPVGLSG
APGPKGGRGLPGPKGEQGNVGNPGSPGETGPTGPIGLRGTKGPRGEEGKKGDAGFPGPPG
RPGEPGHPGSPGNPGPSGPPGIAGIKGAPGDSGKTGAPGPAGNPGQPGFPGPKGEAGSEG
APGLPGPPGPAGPAGDRGLPGIPGIQGRPGPTGPRGSAGERGMEGKSGADGPPGPQGMQG
PPGPPGSPGESGPPGHPGKEGQPGIAGRTGDKGPPGPHGLPGPPGIQGIQGPPGPLGPAG
PTGERGERGETGPRGVPGPQGVRGPPGAVGSPGMKGERGDLGEKGMKGHRGLIGLQGIPG
APGSPGEKGMDGPPGPPGMEGPPGPKGPQGRDGGPGNPGLSGPPGPRGLSGDSGKAGPVG
PPGPPGQPGPPGEPFGYEAAALAALFNQGQVKGPDPLLGDEPDKLFSDDTPIEEKKRLVF
EFYDKLMQEYEKFRKPTGEKQTPATTCRDLAVSHPELDSGLYWVDPNQGDPKDAIQVYCD
MEKRATCVSAKPKQIQKKNHFVGKGQEIWFSSTDGGFTFNYKADRVQLSFLQLLSKKAEQ
NITVHCRNTVVYKDVKRPNFKKAVKLMAYNDLELVADGNPMFAYTSTQDECQHRDDKWAE
TILTYKTDKPQRLPVVDMAFRDIGSRNQEFGVEIGPVCYS
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccctgcggggttctctgtggccgctcttggctttgttggtgctcactaacgct
caggactataatgaaggaaatgatgatactacgtcatgcgaatctaatggtgaacgttac
gagaatggagaagaatggagcccagacacttgtacatcttgcagttgcgtgctaggaaat
atcatttgtgaaactgaagaatgtccgactatcgagtgcaagacacagaaatacatcccg
ctcggaaaatgctgtcctatatgtgtcgatgacgatgaagttttatcacctgaacaaacc
gttttaccccaagaacctgatgcaccagctgaaattccaaggggagcagtagaaccaaat
taccctctcgtaccgattccaggacctaggggtacttctggggagcctggaacaccagga
tatcccggagaaagaggagaagttggtgaacctggatcacatggtgtacctggcagaccg
ggacctcctgggccacctggtgatcttagcgcttggttccaaggattagctctacagcaa
ggattagggggtgaaaagggaccaccgccggatgccttccagttcatgcaagctcaagtg
gggccagttggaccaagaggatctcctgggccaccaggaccatcaggtcctcaaggtttt
caaggagcgcgaggtgaaacaggagaaccaggaccaccgggtgctccagggcttccagga
gaaagaggattaccaggactaccaggaaaagatggtgaacctggtgaagacggcagacct
ggtccagcaggacctccgggccctccagggcctagaggtcttcctggaatgcctggattg
cctggtattaaaggtcacagggggtttcctggcttagatggcgcaaaaggagaacaagga
cttcaaggagaaaagggaatgcaaggacctgctggaaagatgggtacgacaggtccccta
ggcgcacctggacctagaggtgaaagaggaagagaaggacccacaggaccaccgggaata
agaggaatcgacggcttaccaggacctccaggaccaccgggaccaattggaagaccagga
ccgccaggatttccgggatcacctggagcaaagggtgatgctggacctgtaggccctaaa
ggaagtcaaggattacaaggcccgagaggagaatctggaaaaccaggagtttctggtgaa
ccaggaccaatgggcccttctggaaaagatggttcgcctggagaaaaaggatcaaccgga
gagagtggtcttgctggaccacctggatttccgggagctagaggcccccctggactatca
ggaagtcctggactacctggacccaaaggatcaccgggcatccctggcgaatctggattg
aaaggagaaactggtcgaaaaggagaacaagggggtcctggtcctaggggtcttccagga
acaccaggacaaccaggaaagaggggaaaatctggttcaccaggcccatctggaccgcat
ggccctcctggagaaaggggagttgctggcgctcgcggactgcccggaccagatggacca
gcaggcatgaaaggagcacaaggagacaaaggtccccaaggcccacaaggacctaaagga
tctcagggagaatccggaagaccagggcctccaggacttcaaggcttgagaggactcgct
ggcagaccaggacttccaggcaaagatgggattgctggcgaaagggggcaaccaggagct
gacggcaaaccaggagaaccaggaccgcaaggaatacaaggactcccaggcttaatggga
ttaccaggagctaaaggagatcaaggtgaagctggtcaggatggactgccgggtccaact
ggtccacctggaccacgaggagattccggcaaagaaggtactcctggcccactgggaccg
cctggaccaccaggagagagtggagaaagaggaccaccaggacctcaaggttcaacagga
tttcaaggtcttcccggaaatgatggaagtcctggtcaaagaggcaaggatggtgaacca
ggtcttccaggggctgctggaccaccaggacctccaggagaaaggggtgaaagaggtttt
cctggagacagaggtttaccaggctcccaaggtatgcctggaccaagaggtgaaactgga
ccagctggacaagacggagttcgggggccaccaggagaaaaaggagcgagaggacatagt
ggtccaagtggattactcggtcttccaggctctcgtggtgaaccaggtcctcgaggagct
aaaggcgaccgaggagacgcgggctctccaggtgctgagggaccacaaggacgaccaggg
gatcaagggccgcaaggcttagttggagctgtaggtccaccaggagaagcgggagagaaa
ggtgaaacaggaccgccaggtccagatggacagctgggatcacccggagttccaggggac
agaggagctccaggacccccaggacagcaaggattcccaggaccagtcgggctgtcggga
gcacctggtcctaaaggaggaagaggactaccgggacctaagggagaacaaggcaacgtt
ggtaacccgggatctccaggagaaactggtccaacgggaccgattggacttcgaggaaca
aaaggacctagaggtgaagaaggaaagaagggtgatgctgggtttccagggcccccaggc
cgtccaggagaacctggtcatccgggatcgccaggaaatccaggaccttcgggaccacca
ggaatagcaggaataaagggtgctccaggggacagcggcaaaactggtgctccaggacca
gccggaaatccgggacaacctggttttccaggaccaaaaggcgaagcaggatctgaggga
gctccaggcttaccaggaccaccaggacctgccggtccagctggtgaccgtggtttacca
ggaatacctggcatacaaggcagaccaggtccaactggacctcgtggctcagcgggtgaa
cgtggtatggagggcaagagtggtgcagatggtcctccaggaccgcagggtatgcaagga
cctccgggacctcctggatccccgggtgaatctggccctccaggacatcctggcaaagaa
ggacaaccagggattgctggaaggactggtgataaaggaccaccaggaccacatggtctc
ccaggacctccaggaatccaaggaatccaagggcctccaggacctttaggtccagccgga
ccaactggcgaaagaggagaacgaggcgaaacaggacctcgcggagttcctggtcctcaa
ggcgttaggggacctcctggagcagtcggtagtccaggaatgaaaggtgaacgaggcgat
ctcggtgaaaaaggaatgaaaggtcatcgtggtctaattggtttgcaaggaattccaggc
gcaccaggctcacctggagaaaaaggaatggatggacctcctgggcctccaggaatggag
ggtccaccaggacccaaaggtcctcaaggcagggatggaggtcctggaaatcccggttta
agtggaccaccagggccaagaggtctttctggtgattctggcaaagcgggacctgtaggg
ccaccaggtcctcctggtcaacctgggcctccaggagagccgtttggatatgaagcagct
gctcttgctgctttgtttaaccaaggacaagtaaaagggcctgatccactacttggggat
gaaccagataaactcttctctgatgatactccgatcgaagaaaagaaaagactagtattt
gaattttacgataaactaatgcaagagtatgaaaaattcaggaaaccgacaggagagaag
cagacaccagcaactacctgccgtgacctagcagtctctcatcctgagttggacagcggt
ctttattgggttgatccaaatcaaggggatccaaaagacgccattcaagtatattgcgac
atggaaaaaagagccacttgcgtttcagccaaaccaaaacagattcagaagaagaatcac
ttcgttggaaaaggtcaagaaatatggtttagtagcacagacggcggatttacgttcaac
tacaaggctgatcgcgtccagttaagtttcttgcaactcttaagtaagaaagccgagcaa
aacataacagttcattgtagaaacaccgtcgtttataaagatgtgaaacgaccgaacttc
aaaaaagccgtgaaattaatggcatacaatgacctagagttggttgcagatggcaatcct
atgtttgcttacacttcaactcaagacgaatgccagcatcgagatgacaaatgggcagaa
actattttgacgtacaagaccgacaaaccacaacgtctgcctgtagtggatatggctttc
agagacattggctcaagaaatcaagagtttggagttgaaataggaccagtatgttactcc
taa
DBGET
integrated database retrieval system