Uloborus diversus: 129235276
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Entry
129235276 CDS
T09235
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
udv
Uloborus diversus
Brite
KEGG Orthology (KO) [BR:
udv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
udv03009
]
129235276
Enzymes [BR:
udv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129235276
Ribosome biogenesis [BR:
udv03009
]
Eukaryotic type
Pre-60S particles
Helicases
129235276
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5384
AAA_11
Motif
Other DBs
NCBI-GeneID:
129235276
NCBI-ProteinID:
XP_054724969
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All DBs
Position
2:88375603..88377676
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AA seq
556 aa
AA seq
DB search
MDAHVDDDEPNCSFQDLGLDNRILEAIAQLKWKEPTLIQEKAIPLAMEGKDILARARTGS
GKTAAFVIPILQQILQRKKNSNEKEISVLILAPSKELCKQIHKNILELSIYCSRDAVCFD
VSPQVDLTAQRPLLLEKPDIVIGTPMRVLAHLQEKNIVLQDSLKTLVIDEADLLFSFGCE
KDITSIINYLPSIYQAVLMSATMSNELKTIKKLVLHNPVILKLKEPELPESDQLTQYHIK
CEQEDKFVLIYALFKLNLIQGKSLIFVSSVDRCYRLKLFLEQFGIKSCVLNSELPATCRC
HAVSQFNSGIYDIIIASDERVTEEPGPSTSKKRFKKDKEYGISRGIDFQFVSNVINFDFP
ATAEAYVHRVGRTARGNADGTALSFVSAKEMPFLQAVEEYFVDEAGNCKAQFKPYLFKMD
ELESFRYRARDAYRAVTKIAVREARLKEIKIEALNSRSLKPYFEDNPRDLQILRHDKSLH
TVKLQSHLKDVPDYIIPNILKNIVPVKKEEKNTLKRKGRGKNTGSRASKRFKKQQKDPLK
SFQFAGLTELESRRKK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacatgttgatgacgatgaaccaaattgcagttttcaagatctaggtttagat
aatcggatattagaagctatagcccaattaaaatggaaagaaccgactcttatacaagaa
aaagccattcctttagcaatggaaggtaaagatatattggctcgcgctcgaactggctcc
ggtaaaactgcagcatttgttattcccattctacaacaaattttacagcgtaaaaaaaat
tctaacgagaaagaaattagtgtgcttattttagcaccatctaaggagctttgcaaacaa
attcataagaatatactggaattgagtatttattgttcacgggatgcggtttgttttgat
gtttcgcctcaagtcgatttaactgctcaaagacctttattacttgaaaagccggacatt
gttattggaacaccaatgcgagttctcgcacatctgcaggaaaagaatattgttttacaa
gattctttgaaaactcttgttatagatgaagcagatctgctgttttctttcgggtgtgaa
aaagacattacttcaatcattaactatttaccttctatatatcaagcggtactaatgtct
gcgaccatgtcaaacgagctgaaaactataaagaaacttgttctccacaatcctgttatt
ttaaaattgaaagaaccagaattacctgaaagtgatcagctgacacagtaccacataaaa
tgtgagcaagaagataagtttgtgctaatttatgcactgtttaagctaaatttgattcaa
ggaaaatcattaatttttgtcagttcagttgacaggtgttatcgacttaaattgtttctt
gaacaatttggcatcaaaagttgcgttttaaattcagagttgccagcaacttgccgttgt
catgctgtcagtcagtttaatagtggaatttatgatattataatagcatctgatgaacga
gtgaccgaagagcctggaccaagtacttcaaaaaagagattcaagaaagataaggaatat
ggaatatcgcgaggcatagattttcagtttgtatccaatgtaatcaactttgattttcca
gcaactgcagaagcatatgtgcacagagtaggtagaactgcccgtggaaatgcggatggt
acagctttgtcttttgtaagtgcaaaagaaatgccttttctacaagctgtagaagaatat
tttgttgatgaagcaggtaactgtaaagcacagttcaagccatatttgttcaagatggat
gaattggaaagctttagatatcgagcacgtgatgcatatcgagctgtcacaaaaatagct
gtcagggaggctcgtctgaaggaaattaaaattgaagcattaaattcaagaagcttgaag
ccatattttgaagataatccaagagatttacagattctaaggcatgataagtctcttcat
actgtaaaattacaatcgcatttgaaggatgttccagattatattataccaaatattttg
aaaaacatcgttcctgttaagaaggaagaaaagaatacgttaaaaaggaagggacggggg
aagaatacaggaagtcgtgcaagcaaaagatttaaaaagcagcaaaaagaccctctgaaa
agttttcagtttgctggtttaacagaactggagagtcgtaggaaaaaataa
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