Candidatus Uabimicrobium helgolandensis: UABHE_000091
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Entry
UABHE_000091 CDS
T10824
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uhl03016
]
UABHE_000091
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
UABHE_000091
Transfer RNA biogenesis [BR:
uhl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
UABHE_000091
Prokaryotic type
UABHE_000091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
TIM
HD
Motif
Other DBs
NCBI-ProteinID:
XEY22386
LinkDB
All DBs
Position
138001..138915
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AA seq
304 aa
AA seq
DB search
MSQRELTILGTSGQVPTRYRNHNGYLLKWDKQGFLFDPGEGIQRQMIYANVSTSAITKIF
ITHFHGDHCLGLAGLSQRISLDKVAHPIEIYYPVSGQEFYERLRKSTIFHDVAHIVDCPV
SQEGVIFEDEQFVITAKQLSHSVDTFGYRIQEKDGRTMLPNKLAEYNVKGPSIGALQRDG
YLEVDGKRIAVEDVSVLRRGQSMAFVMDTRVCQAAADLAENVDLLVCEATYLKQHSVEAK
DRGHLTAEQAATIAKNANVRKVVLSHFSQRYPHTDLILQEAKSVFDHVHVAKDCEKIPMP
KRQK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaagagaactaactattttaggaacctcggggcaagttcctacacgttataga
aaccacaacggttacttgttaaaatgggacaaacagggttttttgtttgatcctggagaa
ggtatacagcggcaaatgatatatgccaacgtttctacttcagcaataaccaaaatattt
attacccattttcatggtgaccattgtttaggacttgctggcttatcgcaaagaatttct
ttggataaagtagcacaccctattgaaatatactatccggtttccggccaagaattttat
gagcgcttacgaaaatcgacaatatttcacgatgtagcacacattgtcgattgtcctgtt
tcgcaagaaggcgttatttttgaagatgagcaatttgtaataacagcaaaacaactcagc
catagtgtcgatacttttgggtataggatacaagaaaaagatggaagaacaatgttgcca
aataaacttgctgagtataacgtaaaaggtccttctataggtgcgttgcagcgagatggt
tatcttgaggtagatggaaaacgtattgctgttgaggatgtaagcgttttacgtagagga
caaagcatggcttttgttatggatactagagtatgtcaagcagcagccgatttagctgaa
aatgtagatcttttggtatgcgaagcgacatacttaaaacaacattctgtagaagcaaaa
gatcggggacacctaaccgctgaacaggcagcaactatagcaaaaaatgcaaatgtacgt
aaagtagtgcttagtcacttttcacaacgttatcctcatacagatttaattttacaagag
gcaaaatctgtttttgatcacgtgcatgttgctaaagattgcgaaaaaattccgatgccc
aaacgccaaaagtag
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