Candidatus Uabimicrobium helgolandensis: UABHE_000251
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Entry
UABHE_000251 CDS
T10824
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UABHE_000251 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uhl03019
]
UABHE_000251 (groL)
03110 Chaperones and folding catalysts [BR:
uhl03110
]
UABHE_000251 (groL)
03029 Mitochondrial biogenesis [BR:
uhl03029
]
UABHE_000251 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uhl04147
]
UABHE_000251 (groL)
Enzymes [BR:
uhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UABHE_000251 (groL)
Messenger RNA biogenesis [BR:
uhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UABHE_000251 (groL)
Chaperones and folding catalysts [BR:
uhl03110
]
Heat shock proteins
HSP60 / Chaperonin
UABHE_000251 (groL)
Mitochondrial biogenesis [BR:
uhl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UABHE_000251 (groL)
Exosome [BR:
uhl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UABHE_000251 (groL)
Exosomal proteins of other body fluids (saliva and urine)
UABHE_000251 (groL)
Exosomal proteins of breast cancer cells
UABHE_000251 (groL)
Exosomal proteins of colorectal cancer cells
UABHE_000251 (groL)
Exosomal proteins of bladder cancer cells
UABHE_000251 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MukB_hinge
DUF7342
ARM_ECM29_C
Motif
Other DBs
NCBI-ProteinID:
XEY22542
LinkDB
All DBs
Position
complement(368634..370322)
Genome browser
AA seq
562 aa
AA seq
DB search
MGKKKIAFDAEAREAIRQGVRTLARAVKVTLGPRGRNVVIEKSFGAPTVTKDGVTVAKEV
ELEDSYQNMGAQMVKEVASKTSDIAGDGTTTATVLAEAIFEEGLKNVVAGANPMALKRGI
EKAVETCVEFLEKNSTPIKDKTEIAQVGTIASNNDKLIGDIIADAMEKVGKDGVITVEEG
KSLETTVNLVEGMQFDKGYISPHFVTNADSMEAVVENPLILVHEKKISAVKDLVPILEKV
AQAGKPLLIIAEDIDGEALATLVVNKLRGIINCCAVKAPGFGDRRKAMLEDIAILTGGKA
IFEDLGIELENISVEDLGSAKKVIINKDNTTIIEGAGTTEDIQGRIKQIRREIENSTSDY
DVEKLQERLAKLSGGVAEIYVGAAVEVAMKEKKARVEDALHATRAAVEEGILPGGGATLL
RCRKVLGELKDKSQGDEKTGIDIVQRALSAPLRQIVENAGLDGSVIIQNILASDDNNYGY
NANINEYCDLVKTGIIDPTKVTRCALQHASSISSLLLTTDALISEIKEEKPAMPGGGGMG
GMGGMGGMGGMGGMGGMPGMGF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaaaaaaattgcatttgacgcagaagcaagagaagctatacgccaaggcgta
agaactctagctcgtgcagtcaaagtaactttaggacctagagggcgcaacgttgtaatt
gaaaagagctttggtgctccaactgtaaccaaagatggagtgacagttgctaaagaagta
gaactagaagactcgtatcaaaacatgggcgcgcaaatggtaaaagaagttgcttcaaaa
acttctgacatagctggagatggaactacaacagctactgtacttgcggaagctattttt
gaagagggcttaaaaaacgtagttgcgggagcaaaccctatggcactaaaaagagggatt
gaaaaagctgtcgaaacatgcgttgagttcctagaaaaaaatagtacgcctatcaaagat
aaaacagaaatcgcacaagttggaacaattgcttctaacaacgacaagcttatcggagat
attattgccgatgccatggaaaaagtaggcaaagatggcgttattactgttgaagaagga
aaaagcttggaaacaacagtaaatcttgttgagggaatgcaatttgataagggatatatt
tctcctcattttgtaacaaacgcagactccatggaagctgttgttgaaaatccgcttatt
ttagtgcatgaaaaaaagatttcagcagtaaaagacctagttcctatacttgaaaaagta
gcacaagcaggcaagccacttttaatcatagcagaagatattgacggtgaagcacttgct
actttagttgtgaataaattgcgtggcattataaactgttgtgcagtaaaagctccaggt
ttcggagatcgtcgtaaagcaatgcttgaagatattgcgatactaacaggtggcaaagct
atatttgaagatcttggtatagagcttgaaaatatatctgttgaagatcttggatccgca
aaaaaagtaattattaacaaagataatactacaattatcgaaggcgcaggaacgacagaa
gatatacaaggtcgcatcaagcaaatacgccgcgaaattgaaaactcaacatctgattat
gacgtggagaaacttcaagaaagattagcaaagctttcaggaggagttgcagaaatatac
gttggagctgctgttgaagttgctatgaaagagaaaaaagcacgagttgaagatgcacta
catgctacgcgcgcagcggtagaagaaggtatacttcctggtggcggtgcaactttacta
agatgccgtaaagttcttggtgaattaaaagataaaagccaaggagatgaaaaaacaggt
attgacatagtacagagagcacttagtgcaccattgagacaaatcgttgaaaatgctggt
ctagatggctctgtaattatccaaaacatactagcatctgatgataacaactatggttac
aatgcgaatattaacgaatactgtgatctagttaaaacagggatcattgatccaacaaaa
gtaacaagatgtgctttacagcatgcttcaagcatatcctctttactactaactactgat
gctttaattagcgaaattaaagaagaaaaacctgcaatgccaggtggtggtggtatgggt
ggtatgggtggtatgggtggcatgggtggcatgggtggcatgggtggtatgccaggcatg
ggcttctaa
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