Candidatus Uabimicrobium helgolandensis: UABHE_000363
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Entry
UABHE_000363 CDS
T10824
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
UABHE_000363
Transfer RNA biogenesis [BR:
uhl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
UABHE_000363
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NCBI-ProteinID:
XEY22653
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Position
complement(517720..519684)
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AA seq
654 aa
AA seq
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MNSYVVVGVERRGLLLLAIILKNNNSGKKIEVYTQDREKISIAEKKILWNFNSQIKADNE
KSMRLKIAELIDEYAQQQIDIPTLWELLDEGEIYTLENLLQVYFTDYTNTDAGSLFVALG
KNPLYFKLNNGKFEKNSQQNVEANLQRIHNEKMRQQQEDLFIKWFLSYHGNKDIPEEFVS
LLEKAKTYALYGDLSSSEVKKVGSLLGKTPDEMLLLLENKEVISKNINQVVYRQGLQTKF
SPQVMSEVEEIIKEEVTWEGRRVVSDIWNIAIDDKQTEEVDDAISLHEEDGLSVVGVHIA
DVESVIKKDSALDSMAEDRFATVYFLDGKVPLFPMELVKKRLTLAEDSPRATISGFFHFD
YDGTLQKSKFEKTVLSLRKRATYEDSLGELGKDDHFCKLHEIAQKIRELRCEKGAIITNF
PDTSINIEDENDIKFKLTSATTPAHTVVSEFMIYFNHILAQTMAKKGIPAFYRIQSINNP
VDSLVKDNPVYPIQLRRCLGGATLSLTPGKHATLGLDAYTQGTSPIRRYGDLIIHRQFFQ
FMNTNKMCYSSDEVRRKISSIEKGEKKIKISENERYLFWFYKYLKQQKGKIYKGYVSKAF
DNNRVLVFFPGLFQEFSTKVDRESYAKEGTEVSFRIQGASPRKQRLHLQHVIPN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagttatgttgttgtaggagtagagagaagagggcttttacttcttgctattatt
ttaaaaaataacaatagcggcaaaaaaatcgaagtatatacccaagatagagaaaaaatt
agtattgctgaaaaaaaaatactatggaatttcaacagccaaatcaaagccgataatgaa
aaaagtatgagattaaaaattgcagagctaattgatgaatatgcccaacaacaaattgat
attccaacgttatgggaattattagatgaaggcgaaatatatactctagaaaatctttta
caagtatatttcactgattacacaaatactgacgccggttctctatttgtagctcttgga
aaaaatccactatacttcaaactaaataatggcaaatttgaaaaaaattctcagcaaaat
gtagaagcaaatctccaaagaattcacaatgaaaaaatgcgccaacaacaagaagatttg
tttataaagtggtttctctcttaccacggcaacaaagacattccagaagagtttgtttcc
cttctcgaaaaggcaaaaacatatgctctttatggtgatctatcaagttcagaagtaaaa
aaagtaggtagcctattaggaaaaacacccgacgaaatgctacttcttttagaaaataaa
gaagtcatcagcaaaaatattaatcaagtcgtttatcgccaaggattacaaactaaattt
tctccacaagtcatgtcagaagtggaagaaattattaaagaagaagttacctgggaaggt
cgtcgtgtagtaagtgatatatggaacattgcgattgatgataagcaaacagaagaagtt
gatgatgccatttcactccatgaagaagatggtctatccgtagtaggcgttcatattgct
gatgttgaatcagtaataaaaaaagatagcgctcttgattctatggcagaagatcgattt
gccacagtttattttcttgatggaaaagtaccactatttccaatggaacttgttaaaaag
cgtctaacactagcagaagattccccaagagccacaatttctggcttttttcattttgat
tatgacggaactttacaaaaaagtaaattcgaaaaaaccgtccttagtttgcgaaaaaga
gcaacatacgaagatagcctcggcgaattaggaaaagatgatcatttttgtaaactgcac
gaaatagcacaaaaaattcgcgaattacgctgcgaaaaaggtgccatcataacgaatttt
cctgacacgagtattaatatcgaagacgaaaatgacattaagttcaaattaacctcagca
actactccagcgcacacagtagtatctgaattcatgatttacttcaatcatattcttgct
caaacaatggccaaaaagggcatccctgctttttatagaatacaatcaataaacaatcct
gtagatagtttggtaaaagacaaccccgtttaccctatacaacttcgtagatgtttagga
ggtgcaactttatctttaacaccaggaaagcacgcaactcttggtttagatgcttacaca
caaggaacatcacccattcgccgttacggtgacctaataattcatcgtcaattttttcaa
tttatgaatacaaacaaaatgtgctactcttcagatgaagttagaagaaaaatatcttct
atcgaaaaaggagagaaaaaaatcaaaatatcagaaaacgagcgttatttattttggttt
tacaagtatctgaaacagcaaaaaggcaagatttacaaaggatacgtatctaaagcattt
gacaacaatcgcgtattagtttttttcccaggtctatttcaggaattttccacaaaagta
gatagagaatcttacgcaaaagagggcacagaagtgtcttttcgtattcaaggcgcatcc
ccacgtaaacaaagactacatttacaacatgtaatccctaactag
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