Candidatus Uabimicrobium helgolandensis: UABHE_000621
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Entry
UABHE_000621 CDS
T10824
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00260
Glycine, serine and threonine metabolism
uhl00270
Cysteine and methionine metabolism
uhl00450
Selenocompound metabolism
uhl00670
One carbon pool by folate
uhl01100
Metabolic pathways
uhl01110
Biosynthesis of secondary metabolites
uhl01230
Biosynthesis of amino acids
Module
uhl_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UABHE_000621
00270 Cysteine and methionine metabolism
UABHE_000621
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
UABHE_000621
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UABHE_000621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uhl04147
]
UABHE_000621
Enzymes [BR:
uhl01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
UABHE_000621
Exosome [BR:
uhl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
UABHE_000621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
XEY22900
LinkDB
All DBs
Position
847618..848778
Genome browser
AA seq
386 aa
AA seq
DB search
MPDKFGFSTKALHIGQPVEKEFNSVVPPIYMTTTYKQDSPGEPKSYDYTRAGNPNFGFLE
ETLASLEQANYATIFNSGLSAATSILSKLQPGERVISIDDVYGGTFRLMKNTFIGHHVES
VFGDINNEEWLKNELEKGARLVWIESPTNPLLTLADIQKIAELAHAHNAELVVDNTFASP
YFQNPLLLGADLVLHSSTKYIGGHSDIVGGCAATNSKEWKEHLDYARKAIGFNPSPFDAW
LLSRSIKTLAVRMNKHQENALELAKRLDSHPKVKTTIYPGLESHPQHQLAQKQMSGYSGI
VSVLFDLDLEQTKKLISSFKLIKLAESLGAVESLVCHPASMTHASIPRELRIAHGLEDGL
IRISVGLEDVEDLWIDITSVLGTVEK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccagataaatttggattctcaacaaaagcattacatattggtcaaccagtagaaaaa
gaatttaatagtgttgttcctcctatttatatgacaaccacatacaaacaagattcccct
ggagaaccaaaatcatacgactacacaagagctggaaacccaaactttggttttttagaa
gagactcttgctagtttggaacaagcaaattacgccacaatttttaattctggtctgtca
gcagcaacaagtattcttagtaaattacaacctggtgaacgagtaatatcaatagatgat
gtttatggtggaacttttcgtttaatgaagaataccttcattggacaccacgttgaatct
gtgtttggcgacataaataacgaagaatggctgaaaaatgaactagaaaagggagcacga
cttgtatggattgagtctcctacaaatccacttttaactcttgctgatatacaaaaaata
gcagagctagctcatgcacacaacgcagaattagttgtagataacacattcgcatctccg
tattttcagaatccactactacttggtgctgatttggttctacattctagtaccaaatat
attggtggacatagtgatattgttggcggatgtgcagcaaccaatagtaaagaatggaaa
gagcatttagattatgcaagaaaagctattggttttaatccttctccattcgatgcttgg
cttctaagtcgcagtatcaagactcttgctgttcgtatgaataaacaccaagaaaatgct
ctagagttagcaaaaagattagatagtcatccaaaagtaaaaacaaccatataccctggt
ctcgaatctcatccgcaacatcagttagcgcaaaaacaaatgagtggatattccggtatt
gtttctgttctttttgatcttgatttagaacaaacaaaaaaactaatttcttcttttaaa
ttaatcaagctagcagaaagtctaggggctgtcgaatcactagtttgccaccctgcttct
atgactcacgcttctataccaagagaacttagaatagctcatggtctcgaagatggctta
attcgaatatcagtaggtttagaagatgtcgaagacctatggatcgatattacttcggtt
ttagggactgtggaaaaataa
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